Gene : Lus10015378.g L. usitatissimum v1.0
Defline:  (1 of 5) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  43
Name:  ? Lus10015378.g Secondary Identifier:  ? PAC:23160869
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-3461 Linum usitatissimum pathologic  
Lusitatissimum PWY-3462 Linum usitatissimum pathologic  
Lusitatissimum PWY-3481 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10015378.g 0.5kb upstream 0.5kb upstream 6793 true scaffold635: 212440-219232 Linum usitatissimum
Lus10015378.g 0.5kb upstream 0.5kb upstream 500 false scaffold635: 218733-219232 Linum usitatissimum
Lus10015378.g 0.5kb downstream 0.5kb downstream 6793 true scaffold635: 211940-218732 Linum usitatissimum
Lus10015378.g 0.5kb downstream 0.5kb downstream 500 false scaffold635: 211940-212439 Linum usitatissimum
Lus10015378.g 1.0kb upstream 1.0kb upstream 7293 true scaffold635: 212440-219732 Linum usitatissimum
Lus10015378.g 1.0kb upstream 1.0kb upstream 1000 false scaffold635: 218733-219732 Linum usitatissimum
Lus10015378.g 1.0kb downstream 1.0kb downstream 7293 true scaffold635: 211440-218732 Linum usitatissimum
Lus10015378.g 1.0kb downstream 1.0kb downstream 1000 false scaffold635: 211440-212439 Linum usitatissimum
Lus10015378.g 2.0kb upstream 2.0kb upstream 8293 true scaffold635: 212440-220732 Linum usitatissimum
Lus10015378.g 2.0kb upstream 2.0kb upstream 2000 false scaffold635: 218733-220732 Linum usitatissimum
Lus10015378.g 2.0kb downstream 2.0kb downstream 8293 true scaffold635: 210440-218732 Linum usitatissimum
Lus10015378.g 2.0kb downstream 2.0kb downstream 2000 false scaffold635: 210440-212439 Linum usitatissimum
Lus10015378.g 5.0kb upstream 5.0kb upstream 11293 true scaffold635: 212440-223732 Linum usitatissimum
Lus10015378.g 5.0kb upstream 5.0kb upstream 5000 false scaffold635: 218733-223732 Linum usitatissimum
Lus10015378.g 5.0kb downstream 5.0kb downstream 11293 true scaffold635: 207440-218732 Linum usitatissimum
Lus10015378.g 5.0kb downstream 5.0kb downstream 5000 false scaffold635: 207440-212439 Linum usitatissimum
Lus10015378.g 10.0kb upstream 10.0kb upstream 16293 true scaffold635: 212440-228732 Linum usitatissimum
Lus10015378.g 10.0kb upstream 10.0kb upstream 10000 false scaffold635: 218733-228732 Linum usitatissimum
Lus10015378.g 10.0kb downstream 10.0kb downstream 16293 true scaffold635: 202440-218732 Linum usitatissimum
Lus10015378.g 10.0kb downstream 10.0kb downstream 10000 false scaffold635: 202440-212439 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121561134 5273 Angiosperm Singleton cluster - no MSA
122422405 5262 Malpighiales Singleton cluster - no MSA
124214506 5268 Malvidae Singleton cluster - no MSA
123932249 5270 Rosid Singleton cluster - no MSA
123511490 5271 Pentapetalae Singleton cluster - no MSA
122546549 5272 Eudicot Singleton cluster - no MSA
120833708 5274 Embryophyte Singleton cluster - no MSA
122875032 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain