Gene : Lus10042899.g L. usitatissimum v1.0
Defline:  (1 of 2) PF00289//PF02785//PF02786 - Carbamoyl-phosphate synthase L chain, N-terminal domain (CPSase_L_chain) // Biotin carboxylase C-terminal domain (Biotin_carb_C) // Carbamoyl-phosphate synthase L chain, ATP binding domain (CPSase_L_D2) Genomic Order:  387
Name:  ? Lus10042899.g Secondary Identifier:  ? PAC:23181976
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY0-1264 Linum usitatissimum pathologic  
Lusitatissimum PWY-4381 Linum usitatissimum pathologic  
Lusitatissimum PWY-5156 Linum usitatissimum pathologic  
Lusitatissimum PWY-7388 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10042899.g 0.5kb upstream 0.5kb upstream 5762 true scaffold67: 2659132-2664893 Linum usitatissimum
Lus10042899.g 0.5kb upstream 0.5kb upstream 500 false scaffold67: 2659132-2659631 Linum usitatissimum
Lus10042899.g 0.5kb downstream 0.5kb downstream 5762 true scaffold67: 2659632-2665393 Linum usitatissimum
Lus10042899.g 0.5kb downstream 0.5kb downstream 500 false scaffold67: 2664894-2665393 Linum usitatissimum
Lus10042899.g 1.0kb upstream 1.0kb upstream 6262 true scaffold67: 2658632-2664893 Linum usitatissimum
Lus10042899.g 1.0kb upstream 1.0kb upstream 1000 false scaffold67: 2658632-2659631 Linum usitatissimum
Lus10042899.g 1.0kb downstream 1.0kb downstream 6262 true scaffold67: 2659632-2665893 Linum usitatissimum
Lus10042899.g 1.0kb downstream 1.0kb downstream 1000 false scaffold67: 2664894-2665893 Linum usitatissimum
Lus10042899.g 2.0kb upstream 2.0kb upstream 7262 true scaffold67: 2657632-2664893 Linum usitatissimum
Lus10042899.g 2.0kb upstream 2.0kb upstream 2000 false scaffold67: 2657632-2659631 Linum usitatissimum
Lus10042899.g 2.0kb downstream 2.0kb downstream 7262 true scaffold67: 2659632-2666893 Linum usitatissimum
Lus10042899.g 2.0kb downstream 2.0kb downstream 2000 false scaffold67: 2664894-2666893 Linum usitatissimum
Lus10042899.g 5.0kb upstream 5.0kb upstream 10262 true scaffold67: 2654632-2664893 Linum usitatissimum
Lus10042899.g 5.0kb upstream 5.0kb upstream 5000 false scaffold67: 2654632-2659631 Linum usitatissimum
Lus10042899.g 5.0kb downstream 5.0kb downstream 10262 true scaffold67: 2659632-2669893 Linum usitatissimum
Lus10042899.g 5.0kb downstream 5.0kb downstream 5000 false scaffold67: 2664894-2669893 Linum usitatissimum
Lus10042899.g 10.0kb upstream 10.0kb upstream 15262 true scaffold67: 2649632-2664893 Linum usitatissimum
Lus10042899.g 10.0kb upstream 10.0kb upstream 10000 false scaffold67: 2649632-2659631 Linum usitatissimum
Lus10042899.g 10.0kb downstream 10.0kb downstream 15262 true scaffold67: 2659632-2674893 Linum usitatissimum
Lus10042899.g 10.0kb downstream 10.0kb downstream 10000 false scaffold67: 2664894-2674893 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121561314 5273 Angiosperm Singleton cluster - no MSA
122422667 5262 Malpighiales Singleton cluster - no MSA
124214731 5268 Malvidae Singleton cluster - no MSA
123932442 5270 Rosid Singleton cluster - no MSA
123511671 5271 Pentapetalae Singleton cluster - no MSA
122546729 5272 Eudicot Singleton cluster - no MSA
120833888 5274 Embryophyte Singleton cluster - no MSA
122875212 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain