Gene : Lus10007194.g L. usitatissimum v1.0
Defline:  (1 of 4) 1.3.3.4 - Protoporphyrinogen oxidase / Protoporphyrinogenase Genomic Order:  7
Name:  ? Lus10007194.g Secondary Identifier:  ? PAC:23167612
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum CHLOROPHYLL-SYN Linum usitatissimum pathologic  
Lusitatissimum HEME-BIOSYNTHESIS-II Linum usitatissimum pathologic  
Lusitatissimum PWY-5918 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10007194.g 0.5kb upstream 0.5kb upstream 3241 true scaffold674: 79050-82290 Linum usitatissimum
Lus10007194.g 0.5kb upstream 0.5kb upstream 500 false scaffold674: 81791-82290 Linum usitatissimum
Lus10007194.g 0.5kb downstream 0.5kb downstream 3241 true scaffold674: 78550-81790 Linum usitatissimum
Lus10007194.g 0.5kb downstream 0.5kb downstream 500 false scaffold674: 78550-79049 Linum usitatissimum
Lus10007194.g 1.0kb upstream 1.0kb upstream 3741 true scaffold674: 79050-82790 Linum usitatissimum
Lus10007194.g 1.0kb upstream 1.0kb upstream 1000 false scaffold674: 81791-82790 Linum usitatissimum
Lus10007194.g 1.0kb downstream 1.0kb downstream 3741 true scaffold674: 78050-81790 Linum usitatissimum
Lus10007194.g 1.0kb downstream 1.0kb downstream 1000 false scaffold674: 78050-79049 Linum usitatissimum
Lus10007194.g 2.0kb upstream 2.0kb upstream 4741 true scaffold674: 79050-83790 Linum usitatissimum
Lus10007194.g 2.0kb upstream 2.0kb upstream 2000 false scaffold674: 81791-83790 Linum usitatissimum
Lus10007194.g 2.0kb downstream 2.0kb downstream 4741 true scaffold674: 77050-81790 Linum usitatissimum
Lus10007194.g 2.0kb downstream 2.0kb downstream 2000 false scaffold674: 77050-79049 Linum usitatissimum
Lus10007194.g 5.0kb upstream 5.0kb upstream 7741 true scaffold674: 79050-86790 Linum usitatissimum
Lus10007194.g 5.0kb upstream 5.0kb upstream 5000 false scaffold674: 81791-86790 Linum usitatissimum
Lus10007194.g 5.0kb downstream 5.0kb downstream 7741 true scaffold674: 74050-81790 Linum usitatissimum
Lus10007194.g 5.0kb downstream 5.0kb downstream 5000 false scaffold674: 74050-79049 Linum usitatissimum
Lus10007194.g 10.0kb upstream 10.0kb upstream 12741 true scaffold674: 79050-91790 Linum usitatissimum
Lus10007194.g 10.0kb upstream 10.0kb upstream 10000 false scaffold674: 81791-91790 Linum usitatissimum
Lus10007194.g 10.0kb downstream 10.0kb downstream 12741 true scaffold674: 69050-81790 Linum usitatissimum
Lus10007194.g 10.0kb downstream 10.0kb downstream 10000 false scaffold674: 69050-79049 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452263 5262 Malpighiales View MSA
124242274 5268 Malvidae View MSA
124065931 5270 Rosid View MSA
123747490 5271 Pentapetalae View MSA
122787686 5272 Eudicot View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain