Gene : Lus10042923.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11680:SF12 - SERINE HYDROXYMETHYLTRANSFERASE 2, MITOCHONDRIAL Genomic Order:  411
Name:  ? Lus10042923.g Secondary Identifier:  ? PAC:23181689
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum GLYSYN-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-2161 Linum usitatissimum pathologic  
Lusitatissimum PWY-3841 Linum usitatissimum pathologic  
Lusitatissimum SER-GLYSYN-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10042923.g 0.5kb upstream 0.5kb upstream 4413 true scaffold67: 2823244-2827656 Linum usitatissimum
Lus10042923.g 0.5kb upstream 0.5kb upstream 500 false scaffold67: 2823244-2823743 Linum usitatissimum
Lus10042923.g 0.5kb downstream 0.5kb downstream 4413 true scaffold67: 2823744-2828156 Linum usitatissimum
Lus10042923.g 0.5kb downstream 0.5kb downstream 500 false scaffold67: 2827657-2828156 Linum usitatissimum
Lus10042923.g 1.0kb upstream 1.0kb upstream 4913 true scaffold67: 2822744-2827656 Linum usitatissimum
Lus10042923.g 1.0kb upstream 1.0kb upstream 1000 false scaffold67: 2822744-2823743 Linum usitatissimum
Lus10042923.g 1.0kb downstream 1.0kb downstream 4913 true scaffold67: 2823744-2828656 Linum usitatissimum
Lus10042923.g 1.0kb downstream 1.0kb downstream 1000 false scaffold67: 2827657-2828656 Linum usitatissimum
Lus10042923.g 2.0kb upstream 2.0kb upstream 5913 true scaffold67: 2821744-2827656 Linum usitatissimum
Lus10042923.g 2.0kb upstream 2.0kb upstream 2000 false scaffold67: 2821744-2823743 Linum usitatissimum
Lus10042923.g 2.0kb downstream 2.0kb downstream 5913 true scaffold67: 2823744-2829656 Linum usitatissimum
Lus10042923.g 2.0kb downstream 2.0kb downstream 2000 false scaffold67: 2827657-2829656 Linum usitatissimum
Lus10042923.g 5.0kb upstream 5.0kb upstream 8913 true scaffold67: 2818744-2827656 Linum usitatissimum
Lus10042923.g 5.0kb upstream 5.0kb upstream 5000 false scaffold67: 2818744-2823743 Linum usitatissimum
Lus10042923.g 5.0kb downstream 5.0kb downstream 8913 true scaffold67: 2823744-2832656 Linum usitatissimum
Lus10042923.g 5.0kb downstream 5.0kb downstream 5000 false scaffold67: 2827657-2832656 Linum usitatissimum
Lus10042923.g 10.0kb upstream 10.0kb upstream 13913 true scaffold67: 2813744-2827656 Linum usitatissimum
Lus10042923.g 10.0kb upstream 10.0kb upstream 10000 false scaffold67: 2813744-2823743 Linum usitatissimum
Lus10042923.g 10.0kb downstream 10.0kb downstream 13913 true scaffold67: 2823744-2837656 Linum usitatissimum
Lus10042923.g 10.0kb downstream 10.0kb downstream 10000 false scaffold67: 2827657-2837656 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449832 5262 Malpighiales View MSA
124239143 5268 Malvidae View MSA
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain