Gene : Lus10033535.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR31843:SF2 - ALLENE OXIDE CYCLASE 1, CHLOROPLASTIC-RELATED Genomic Order:  92
Name:  ? Lus10033535.g Secondary Identifier:  ? PAC:23143280
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-735 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10033535.g 0.5kb upstream 0.5kb upstream 1472 true scaffold701: 459536-461007 Linum usitatissimum
Lus10033535.g 0.5kb upstream 0.5kb upstream 500 false scaffold701: 459536-460035 Linum usitatissimum
Lus10033535.g 0.5kb downstream 0.5kb downstream 1472 true scaffold701: 460036-461507 Linum usitatissimum
Lus10033535.g 0.5kb downstream 0.5kb downstream 500 false scaffold701: 461008-461507 Linum usitatissimum
Lus10033535.g 1.0kb upstream 1.0kb upstream 1972 true scaffold701: 459036-461007 Linum usitatissimum
Lus10033535.g 1.0kb upstream 1.0kb upstream 1000 false scaffold701: 459036-460035 Linum usitatissimum
Lus10033535.g 1.0kb downstream 1.0kb downstream 1972 true scaffold701: 460036-462007 Linum usitatissimum
Lus10033535.g 1.0kb downstream 1.0kb downstream 1000 false scaffold701: 461008-462007 Linum usitatissimum
Lus10033535.g 2.0kb upstream 2.0kb upstream 2972 true scaffold701: 458036-461007 Linum usitatissimum
Lus10033535.g 2.0kb upstream 2.0kb upstream 2000 false scaffold701: 458036-460035 Linum usitatissimum
Lus10033535.g 2.0kb downstream 2.0kb downstream 2972 true scaffold701: 460036-463007 Linum usitatissimum
Lus10033535.g 2.0kb downstream 2.0kb downstream 2000 false scaffold701: 461008-463007 Linum usitatissimum
Lus10033535.g 5.0kb upstream 5.0kb upstream 5972 true scaffold701: 455036-461007 Linum usitatissimum
Lus10033535.g 5.0kb upstream 5.0kb upstream 5000 false scaffold701: 455036-460035 Linum usitatissimum
Lus10033535.g 5.0kb downstream 5.0kb downstream 5972 true scaffold701: 460036-466007 Linum usitatissimum
Lus10033535.g 5.0kb downstream 5.0kb downstream 5000 false scaffold701: 461008-466007 Linum usitatissimum
Lus10033535.g 10.0kb upstream 10.0kb upstream 10972 true scaffold701: 450036-461007 Linum usitatissimum
Lus10033535.g 10.0kb upstream 10.0kb upstream 10000 false scaffold701: 450036-460035 Linum usitatissimum
Lus10033535.g 10.0kb downstream 10.0kb downstream 10972 true scaffold701: 460036-471007 Linum usitatissimum
Lus10033535.g 10.0kb downstream 10.0kb downstream 10000 false scaffold701: 461008-471007 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454646 5262 Malpighiales View MSA
124252758 5268 Malvidae View MSA
124066771 5270 Rosid View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain