Gene : Lus10004139.g L. usitatissimum v1.0
Defline:  (1 of 8) PTHR10003 - SUPEROXIDE DISMUTASE CU-ZN -RELATED Genomic Order:  27
Name:  ? Lus10004139.g Secondary Identifier:  ? PAC:23157515
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum DETOX1-PWY Linum usitatissimum pathologic  
Lusitatissimum DETOX1-PWY-1 Linum usitatissimum pathologic  
Lusitatissimum PWY-6854 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10004139.g 0.5kb upstream 0.5kb upstream 1893 true scaffold709: 140743-142635 Linum usitatissimum
Lus10004139.g 0.5kb upstream 0.5kb upstream 500 false scaffold709: 140743-141242 Linum usitatissimum
Lus10004139.g 0.5kb downstream 0.5kb downstream 1893 true scaffold709: 141243-143135 Linum usitatissimum
Lus10004139.g 0.5kb downstream 0.5kb downstream 500 false scaffold709: 142636-143135 Linum usitatissimum
Lus10004139.g 1.0kb upstream 1.0kb upstream 2393 true scaffold709: 140243-142635 Linum usitatissimum
Lus10004139.g 1.0kb upstream 1.0kb upstream 1000 false scaffold709: 140243-141242 Linum usitatissimum
Lus10004139.g 1.0kb downstream 1.0kb downstream 2393 true scaffold709: 141243-143635 Linum usitatissimum
Lus10004139.g 1.0kb downstream 1.0kb downstream 1000 false scaffold709: 142636-143635 Linum usitatissimum
Lus10004139.g 2.0kb upstream 2.0kb upstream 3393 true scaffold709: 139243-142635 Linum usitatissimum
Lus10004139.g 2.0kb upstream 2.0kb upstream 2000 false scaffold709: 139243-141242 Linum usitatissimum
Lus10004139.g 2.0kb downstream 2.0kb downstream 3393 true scaffold709: 141243-144635 Linum usitatissimum
Lus10004139.g 2.0kb downstream 2.0kb downstream 2000 false scaffold709: 142636-144635 Linum usitatissimum
Lus10004139.g 5.0kb upstream 5.0kb upstream 6393 true scaffold709: 136243-142635 Linum usitatissimum
Lus10004139.g 5.0kb upstream 5.0kb upstream 5000 false scaffold709: 136243-141242 Linum usitatissimum
Lus10004139.g 5.0kb downstream 5.0kb downstream 6393 true scaffold709: 141243-147635 Linum usitatissimum
Lus10004139.g 5.0kb downstream 5.0kb downstream 5000 false scaffold709: 142636-147635 Linum usitatissimum
Lus10004139.g 10.0kb upstream 10.0kb upstream 11393 true scaffold709: 131243-142635 Linum usitatissimum
Lus10004139.g 10.0kb upstream 10.0kb upstream 10000 false scaffold709: 131243-141242 Linum usitatissimum
Lus10004139.g 10.0kb downstream 10.0kb downstream 11393 true scaffold709: 141243-152635 Linum usitatissimum
Lus10004139.g 10.0kb downstream 10.0kb downstream 10000 false scaffold709: 142636-152635 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461896 5262 Malpighiales View MSA
124238216 5268 Malvidae View MSA
124071759 5270 Rosid View MSA
123743890 5271 Pentapetalae View MSA
122797763 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain