Gene : Lus10001200.g L. usitatissimum v1.0
Defline:  (1 of 1) PTHR11468:SF4 - ALPHA-GLUCAN PHOSPHORYLASE 2, CYTOSOLIC Genomic Order:  5
Name:  ? Lus10001200.g Secondary Identifier:  ? PAC:23173050
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7238 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10001200.g 0.5kb upstream 0.5kb upstream 8340 true scaffold728: 17820-26159 Linum usitatissimum
Lus10001200.g 0.5kb upstream 0.5kb upstream 500 false scaffold728: 25660-26159 Linum usitatissimum
Lus10001200.g 0.5kb downstream 0.5kb downstream 8340 true scaffold728: 17320-25659 Linum usitatissimum
Lus10001200.g 0.5kb downstream 0.5kb downstream 500 false scaffold728: 17320-17819 Linum usitatissimum
Lus10001200.g 1.0kb upstream 1.0kb upstream 8840 true scaffold728: 17820-26659 Linum usitatissimum
Lus10001200.g 1.0kb upstream 1.0kb upstream 1000 false scaffold728: 25660-26659 Linum usitatissimum
Lus10001200.g 1.0kb downstream 1.0kb downstream 8840 true scaffold728: 16820-25659 Linum usitatissimum
Lus10001200.g 1.0kb downstream 1.0kb downstream 1000 false scaffold728: 16820-17819 Linum usitatissimum
Lus10001200.g 2.0kb upstream 2.0kb upstream 9840 true scaffold728: 17820-27659 Linum usitatissimum
Lus10001200.g 2.0kb upstream 2.0kb upstream 2000 false scaffold728: 25660-27659 Linum usitatissimum
Lus10001200.g 2.0kb downstream 2.0kb downstream 9840 true scaffold728: 15820-25659 Linum usitatissimum
Lus10001200.g 2.0kb downstream 2.0kb downstream 2000 false scaffold728: 15820-17819 Linum usitatissimum
Lus10001200.g 5.0kb upstream 5.0kb upstream 12840 true scaffold728: 17820-30659 Linum usitatissimum
Lus10001200.g 5.0kb upstream 5.0kb upstream 5000 false scaffold728: 25660-30659 Linum usitatissimum
Lus10001200.g 5.0kb downstream 5.0kb downstream 12840 true scaffold728: 12820-25659 Linum usitatissimum
Lus10001200.g 5.0kb downstream 5.0kb downstream 5000 false scaffold728: 12820-17819 Linum usitatissimum
Lus10001200.g 10.0kb upstream 10.0kb upstream 17840 true scaffold728: 17820-35659 Linum usitatissimum
Lus10001200.g 10.0kb upstream 10.0kb upstream 10000 false scaffold728: 25660-35659 Linum usitatissimum
Lus10001200.g 10.0kb downstream 10.0kb downstream 17840 true scaffold728: 7820-25659 Linum usitatissimum
Lus10001200.g 10.0kb downstream 10.0kb downstream 10000 false scaffold728: 7820-17819 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122422913 5262 Malpighiales Singleton cluster - no MSA
124214955 5268 Malvidae Singleton cluster - no MSA
124070356 5270 Rosid View MSA
123742386 5271 Pentapetalae View MSA
122770279 5272 Eudicot View MSA
122048524 5273 Angiosperm View MSA
121348195 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain