Gene : Lus10012996.g L. usitatissimum v1.0
Defline:  (1 of 11) 2.5.1.16 - Spermidine synthase / Putrescine aminopropyltransferase Genomic Order:  11
Name:  ? Lus10012996.g Secondary Identifier:  ? PAC:23149830
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum BSUBPOLYAMSYN-PWY Linum usitatissimum pathologic  
Lusitatissimum POLYAMINSYN3-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-7528 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10012996.g 0.5kb upstream 0.5kb upstream 2604 true scaffold751: 67693-70296 Linum usitatissimum
Lus10012996.g 0.5kb upstream 0.5kb upstream 500 false scaffold751: 69797-70296 Linum usitatissimum
Lus10012996.g 0.5kb downstream 0.5kb downstream 2604 true scaffold751: 67193-69796 Linum usitatissimum
Lus10012996.g 0.5kb downstream 0.5kb downstream 500 false scaffold751: 67193-67692 Linum usitatissimum
Lus10012996.g 1.0kb upstream 1.0kb upstream 3104 true scaffold751: 67693-70796 Linum usitatissimum
Lus10012996.g 1.0kb upstream 1.0kb upstream 1000 false scaffold751: 69797-70796 Linum usitatissimum
Lus10012996.g 1.0kb downstream 1.0kb downstream 3104 true scaffold751: 66693-69796 Linum usitatissimum
Lus10012996.g 1.0kb downstream 1.0kb downstream 1000 false scaffold751: 66693-67692 Linum usitatissimum
Lus10012996.g 2.0kb upstream 2.0kb upstream 4104 true scaffold751: 67693-71796 Linum usitatissimum
Lus10012996.g 2.0kb upstream 2.0kb upstream 2000 false scaffold751: 69797-71796 Linum usitatissimum
Lus10012996.g 2.0kb downstream 2.0kb downstream 4104 true scaffold751: 65693-69796 Linum usitatissimum
Lus10012996.g 2.0kb downstream 2.0kb downstream 2000 false scaffold751: 65693-67692 Linum usitatissimum
Lus10012996.g 5.0kb upstream 5.0kb upstream 7104 true scaffold751: 67693-74796 Linum usitatissimum
Lus10012996.g 5.0kb upstream 5.0kb upstream 5000 false scaffold751: 69797-74796 Linum usitatissimum
Lus10012996.g 5.0kb downstream 5.0kb downstream 7104 true scaffold751: 62693-69796 Linum usitatissimum
Lus10012996.g 5.0kb downstream 5.0kb downstream 5000 false scaffold751: 62693-67692 Linum usitatissimum
Lus10012996.g 10.0kb upstream 10.0kb upstream 12104 true scaffold751: 67693-79796 Linum usitatissimum
Lus10012996.g 10.0kb upstream 10.0kb upstream 10000 false scaffold751: 69797-79796 Linum usitatissimum
Lus10012996.g 10.0kb downstream 10.0kb downstream 12104 true scaffold751: 57693-69796 Linum usitatissimum
Lus10012996.g 10.0kb downstream 10.0kb downstream 10000 false scaffold751: 57693-67692 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451342 5262 Malpighiales View MSA
124246037 5268 Malvidae View MSA
124061949 5270 Rosid View MSA
123741827 5271 Pentapetalae View MSA
122790008 5272 Eudicot View MSA
122043696 5273 Angiosperm View MSA
121346443 5274 Embryophyte View MSA
123424303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain