Gene : Lus10011899.g L. usitatissimum v1.0

Defline:  (1 of 3) PTHR12565:SF86 - TRANSCRIPTION FACTOR PIF4-RELATED Genomic Order:  67
Name:  ? Lus10011899.g Secondary Identifier:  ? PAC:23169227

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10011899.g 0.5kb upstream 0.5kb upstream 5416 true scaffold754: 308781-314196 Linum usitatissimum
Lus10011899.g 0.5kb upstream 0.5kb upstream 500 false scaffold754: 308781-309280 Linum usitatissimum
Lus10011899.g 0.5kb downstream 0.5kb downstream 5416 true scaffold754: 309281-314696 Linum usitatissimum
Lus10011899.g 0.5kb downstream 0.5kb downstream 500 false scaffold754: 314197-314696 Linum usitatissimum
Lus10011899.g 1.0kb upstream 1.0kb upstream 5916 true scaffold754: 308281-314196 Linum usitatissimum
Lus10011899.g 1.0kb upstream 1.0kb upstream 1000 false scaffold754: 308281-309280 Linum usitatissimum
Lus10011899.g 1.0kb downstream 1.0kb downstream 5916 true scaffold754: 309281-315196 Linum usitatissimum
Lus10011899.g 1.0kb downstream 1.0kb downstream 1000 false scaffold754: 314197-315196 Linum usitatissimum
Lus10011899.g 2.0kb upstream 2.0kb upstream 6916 true scaffold754: 307281-314196 Linum usitatissimum
Lus10011899.g 2.0kb upstream 2.0kb upstream 2000 false scaffold754: 307281-309280 Linum usitatissimum
Lus10011899.g 2.0kb downstream 2.0kb downstream 6916 true scaffold754: 309281-316196 Linum usitatissimum
Lus10011899.g 2.0kb downstream 2.0kb downstream 2000 false scaffold754: 314197-316196 Linum usitatissimum
Lus10011899.g 5.0kb upstream 5.0kb upstream 9916 true scaffold754: 304281-314196 Linum usitatissimum
Lus10011899.g 5.0kb upstream 5.0kb upstream 5000 false scaffold754: 304281-309280 Linum usitatissimum
Lus10011899.g 5.0kb downstream 5.0kb downstream 9916 true scaffold754: 309281-319196 Linum usitatissimum
Lus10011899.g 5.0kb downstream 5.0kb downstream 5000 false scaffold754: 314197-319196 Linum usitatissimum
Lus10011899.g 10.0kb upstream 10.0kb upstream 14916 true scaffold754: 299281-314196 Linum usitatissimum
Lus10011899.g 10.0kb upstream 10.0kb upstream 10000 false scaffold754: 299281-309280 Linum usitatissimum
Lus10011899.g 10.0kb downstream 10.0kb downstream 14916 true scaffold754: 309281-324196 Linum usitatissimum
Lus10011899.g 10.0kb downstream 10.0kb downstream 10000 false scaffold754: 314197-324196 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458716 5262 Malpighiales View MSA
124252658 5268 Malvidae View MSA
124069526 5270 Rosid View MSA
123737897 5271 Pentapetalae View MSA
122794460 5272 Eudicot View MSA
122048181 5273 Angiosperm View MSA
121348763 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain