Gene : Lus10017571.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR31843:SF2 - ALLENE OXIDE CYCLASE 1, CHLOROPLASTIC-RELATED Genomic Order:  3
Name:  ? Lus10017571.g Secondary Identifier:  ? PAC:23155454
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-735 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10017571.g 0.5kb upstream 0.5kb upstream 1448 true scaffold765: 8627-10074 Linum usitatissimum
Lus10017571.g 0.5kb upstream 0.5kb upstream 500 false scaffold765: 8627-9126 Linum usitatissimum
Lus10017571.g 0.5kb downstream 0.5kb downstream 1448 true scaffold765: 9127-10574 Linum usitatissimum
Lus10017571.g 0.5kb downstream 0.5kb downstream 500 false scaffold765: 10075-10574 Linum usitatissimum
Lus10017571.g 1.0kb upstream 1.0kb upstream 1948 true scaffold765: 8127-10074 Linum usitatissimum
Lus10017571.g 1.0kb upstream 1.0kb upstream 1000 false scaffold765: 8127-9126 Linum usitatissimum
Lus10017571.g 1.0kb downstream 1.0kb downstream 1948 true scaffold765: 9127-11074 Linum usitatissimum
Lus10017571.g 1.0kb downstream 1.0kb downstream 1000 false scaffold765: 10075-11074 Linum usitatissimum
Lus10017571.g 2.0kb upstream 2.0kb upstream 2948 true scaffold765: 7127-10074 Linum usitatissimum
Lus10017571.g 2.0kb upstream 2.0kb upstream 2000 false scaffold765: 7127-9126 Linum usitatissimum
Lus10017571.g 2.0kb downstream 2.0kb downstream 2948 true scaffold765: 9127-12074 Linum usitatissimum
Lus10017571.g 2.0kb downstream 2.0kb downstream 2000 false scaffold765: 10075-12074 Linum usitatissimum
Lus10017571.g 5.0kb upstream 5.0kb upstream 5948 true scaffold765: 4127-10074 Linum usitatissimum
Lus10017571.g 5.0kb upstream 5.0kb upstream 5000 false scaffold765: 4127-9126 Linum usitatissimum
Lus10017571.g 5.0kb downstream 5.0kb downstream 5948 true scaffold765: 9127-15074 Linum usitatissimum
Lus10017571.g 5.0kb downstream 5.0kb downstream 5000 false scaffold765: 10075-15074 Linum usitatissimum
Lus10017571.g 10.0kb upstream 10.0kb upstream 10074 true scaffold765: 1-10074 Linum usitatissimum
Lus10017571.g 10.0kb upstream 10.0kb upstream 9126 false scaffold765: 1-9126 Linum usitatissimum
Lus10017571.g 10.0kb downstream 10.0kb downstream 10948 true scaffold765: 9127-20074 Linum usitatissimum
Lus10017571.g 10.0kb downstream 10.0kb downstream 10000 false scaffold765: 10075-20074 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454646 5262 Malpighiales View MSA
124252758 5268 Malvidae View MSA
124066771 5270 Rosid View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain