Gene : Lus10017624.g L. usitatissimum v1.0
Defline:  (1 of 18) 2.5.1.29 - Geranylgeranyl diphosphate synthase / Geranylgeranyl-PP synthetase Genomic Order:  56
Name:  ? Lus10017624.g Secondary Identifier:  ? PAC:23155493
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-5120 Linum usitatissimum pathologic  
Lusitatissimum PWY-5910 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10017624.g 0.5kb upstream 0.5kb upstream 2138 true scaffold765: 246462-248599 Linum usitatissimum
Lus10017624.g 0.5kb upstream 0.5kb upstream 500 false scaffold765: 246462-246961 Linum usitatissimum
Lus10017624.g 0.5kb downstream 0.5kb downstream 2138 true scaffold765: 246962-249099 Linum usitatissimum
Lus10017624.g 0.5kb downstream 0.5kb downstream 500 false scaffold765: 248600-249099 Linum usitatissimum
Lus10017624.g 1.0kb upstream 1.0kb upstream 2638 true scaffold765: 245962-248599 Linum usitatissimum
Lus10017624.g 1.0kb upstream 1.0kb upstream 1000 false scaffold765: 245962-246961 Linum usitatissimum
Lus10017624.g 1.0kb downstream 1.0kb downstream 2638 true scaffold765: 246962-249599 Linum usitatissimum
Lus10017624.g 1.0kb downstream 1.0kb downstream 1000 false scaffold765: 248600-249599 Linum usitatissimum
Lus10017624.g 2.0kb upstream 2.0kb upstream 3638 true scaffold765: 244962-248599 Linum usitatissimum
Lus10017624.g 2.0kb upstream 2.0kb upstream 2000 false scaffold765: 244962-246961 Linum usitatissimum
Lus10017624.g 2.0kb downstream 2.0kb downstream 3638 true scaffold765: 246962-250599 Linum usitatissimum
Lus10017624.g 2.0kb downstream 2.0kb downstream 2000 false scaffold765: 248600-250599 Linum usitatissimum
Lus10017624.g 5.0kb upstream 5.0kb upstream 6638 true scaffold765: 241962-248599 Linum usitatissimum
Lus10017624.g 5.0kb upstream 5.0kb upstream 5000 false scaffold765: 241962-246961 Linum usitatissimum
Lus10017624.g 5.0kb downstream 5.0kb downstream 6638 true scaffold765: 246962-253599 Linum usitatissimum
Lus10017624.g 5.0kb downstream 5.0kb downstream 5000 false scaffold765: 248600-253599 Linum usitatissimum
Lus10017624.g 10.0kb upstream 10.0kb upstream 11638 true scaffold765: 236962-248599 Linum usitatissimum
Lus10017624.g 10.0kb upstream 10.0kb upstream 10000 false scaffold765: 236962-246961 Linum usitatissimum
Lus10017624.g 10.0kb downstream 10.0kb downstream 11638 true scaffold765: 246962-258599 Linum usitatissimum
Lus10017624.g 10.0kb downstream 10.0kb downstream 10000 false scaffold765: 248600-258599 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451890 5262 Malpighiales View MSA
124251250 5268 Malvidae View MSA
124051358 5270 Rosid View MSA
123745518 5271 Pentapetalae View MSA
122795597 5272 Eudicot View MSA
122051071 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain