Gene : Lus10031708.g L. usitatissimum v1.0
Defline:  (1 of 6) 2.2.1.1 - Transketolase / Glycoaldehyde transferase Genomic Order:  57
Name:  ? Lus10031708.g Secondary Identifier:  ? PAC:23180799
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum CALVIN-PWY Linum usitatissimum pathologic  
Lusitatissimum NONOXIPENT-PWY Linum usitatissimum pathologic  
Lusitatissimum PENTOSE-P-PWY Linum usitatissimum pathologic  
Lusitatissimum PHOTOALL-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-5723 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10031708.g 0.5kb upstream 0.5kb upstream 3384 true scaffold783: 318608-321991 Linum usitatissimum
Lus10031708.g 0.5kb upstream 0.5kb upstream 500 false scaffold783: 321492-321991 Linum usitatissimum
Lus10031708.g 0.5kb downstream 0.5kb downstream 3384 true scaffold783: 318108-321491 Linum usitatissimum
Lus10031708.g 0.5kb downstream 0.5kb downstream 500 false scaffold783: 318108-318607 Linum usitatissimum
Lus10031708.g 1.0kb upstream 1.0kb upstream 3884 true scaffold783: 318608-322491 Linum usitatissimum
Lus10031708.g 1.0kb upstream 1.0kb upstream 1000 false scaffold783: 321492-322491 Linum usitatissimum
Lus10031708.g 1.0kb downstream 1.0kb downstream 3884 true scaffold783: 317608-321491 Linum usitatissimum
Lus10031708.g 1.0kb downstream 1.0kb downstream 1000 false scaffold783: 317608-318607 Linum usitatissimum
Lus10031708.g 2.0kb upstream 2.0kb upstream 4884 true scaffold783: 318608-323491 Linum usitatissimum
Lus10031708.g 2.0kb upstream 2.0kb upstream 2000 false scaffold783: 321492-323491 Linum usitatissimum
Lus10031708.g 2.0kb downstream 2.0kb downstream 4884 true scaffold783: 316608-321491 Linum usitatissimum
Lus10031708.g 2.0kb downstream 2.0kb downstream 2000 false scaffold783: 316608-318607 Linum usitatissimum
Lus10031708.g 5.0kb upstream 5.0kb upstream 7884 true scaffold783: 318608-326491 Linum usitatissimum
Lus10031708.g 5.0kb upstream 5.0kb upstream 5000 false scaffold783: 321492-326491 Linum usitatissimum
Lus10031708.g 5.0kb downstream 5.0kb downstream 7884 true scaffold783: 313608-321491 Linum usitatissimum
Lus10031708.g 5.0kb downstream 5.0kb downstream 5000 false scaffold783: 313608-318607 Linum usitatissimum
Lus10031708.g 10.0kb upstream 10.0kb upstream 12884 true scaffold783: 318608-331491 Linum usitatissimum
Lus10031708.g 10.0kb upstream 10.0kb upstream 10000 false scaffold783: 321492-331491 Linum usitatissimum
Lus10031708.g 10.0kb downstream 10.0kb downstream 12884 true scaffold783: 308608-321491 Linum usitatissimum
Lus10031708.g 10.0kb downstream 10.0kb downstream 10000 false scaffold783: 308608-318607 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457115 5262 Malpighiales View MSA
124242357 5268 Malvidae View MSA
124064977 5270 Rosid View MSA
123741287 5271 Pentapetalae View MSA
122787703 5272 Eudicot View MSA
122048752 5273 Angiosperm View MSA
121350420 5274 Embryophyte View MSA
123423818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain