Gene : Lus10032704.g L. usitatissimum v1.0
Defline:  (1 of 3) PTHR22594:SF34 - ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  32
Name:  ? Lus10032704.g Secondary Identifier:  ? PAC:23158959
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10032704.g 0.5kb upstream 0.5kb upstream 2799 true scaffold82: 231463-234261 Linum usitatissimum
Lus10032704.g 0.5kb upstream 0.5kb upstream 500 false scaffold82: 233762-234261 Linum usitatissimum
Lus10032704.g 0.5kb downstream 0.5kb downstream 2799 true scaffold82: 230963-233761 Linum usitatissimum
Lus10032704.g 0.5kb downstream 0.5kb downstream 500 false scaffold82: 230963-231462 Linum usitatissimum
Lus10032704.g 1.0kb upstream 1.0kb upstream 3299 true scaffold82: 231463-234761 Linum usitatissimum
Lus10032704.g 1.0kb upstream 1.0kb upstream 1000 false scaffold82: 233762-234761 Linum usitatissimum
Lus10032704.g 1.0kb downstream 1.0kb downstream 3299 true scaffold82: 230463-233761 Linum usitatissimum
Lus10032704.g 1.0kb downstream 1.0kb downstream 1000 false scaffold82: 230463-231462 Linum usitatissimum
Lus10032704.g 2.0kb upstream 2.0kb upstream 4299 true scaffold82: 231463-235761 Linum usitatissimum
Lus10032704.g 2.0kb upstream 2.0kb upstream 2000 false scaffold82: 233762-235761 Linum usitatissimum
Lus10032704.g 2.0kb downstream 2.0kb downstream 4299 true scaffold82: 229463-233761 Linum usitatissimum
Lus10032704.g 2.0kb downstream 2.0kb downstream 2000 false scaffold82: 229463-231462 Linum usitatissimum
Lus10032704.g 5.0kb upstream 5.0kb upstream 7299 true scaffold82: 231463-238761 Linum usitatissimum
Lus10032704.g 5.0kb upstream 5.0kb upstream 5000 false scaffold82: 233762-238761 Linum usitatissimum
Lus10032704.g 5.0kb downstream 5.0kb downstream 7299 true scaffold82: 226463-233761 Linum usitatissimum
Lus10032704.g 5.0kb downstream 5.0kb downstream 5000 false scaffold82: 226463-231462 Linum usitatissimum
Lus10032704.g 10.0kb upstream 10.0kb upstream 12299 true scaffold82: 231463-243761 Linum usitatissimum
Lus10032704.g 10.0kb upstream 10.0kb upstream 10000 false scaffold82: 233762-243761 Linum usitatissimum
Lus10032704.g 10.0kb downstream 10.0kb downstream 12299 true scaffold82: 221463-233761 Linum usitatissimum
Lus10032704.g 10.0kb downstream 10.0kb downstream 10000 false scaffold82: 221463-231462 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457261 5262 Malpighiales View MSA
124246286 5268 Malvidae View MSA
124074798 5270 Rosid View MSA
123738885 5271 Pentapetalae View MSA
122790023 5272 Eudicot View MSA
122045893 5273 Angiosperm View MSA
121347200 5274 Embryophyte View MSA
123425101 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain