Gene : Lus10032773.g L. usitatissimum v1.0
Defline:  (1 of 3) PTHR11946:SF53 - TYROSINE-TRNA LIGASE Genomic Order:  101
Name:  ? Lus10032773.g Secondary Identifier:  ? PAC:23159044
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10032773.g 0.5kb upstream 0.5kb upstream 2911 true scaffold82: 1179320-1182230 Linum usitatissimum
Lus10032773.g 0.5kb upstream 0.5kb upstream 500 false scaffold82: 1179320-1179819 Linum usitatissimum
Lus10032773.g 0.5kb downstream 0.5kb downstream 2911 true scaffold82: 1179820-1182730 Linum usitatissimum
Lus10032773.g 0.5kb downstream 0.5kb downstream 500 false scaffold82: 1182231-1182730 Linum usitatissimum
Lus10032773.g 1.0kb upstream 1.0kb upstream 3411 true scaffold82: 1178820-1182230 Linum usitatissimum
Lus10032773.g 1.0kb upstream 1.0kb upstream 1000 false scaffold82: 1178820-1179819 Linum usitatissimum
Lus10032773.g 1.0kb downstream 1.0kb downstream 3411 true scaffold82: 1179820-1183230 Linum usitatissimum
Lus10032773.g 1.0kb downstream 1.0kb downstream 1000 false scaffold82: 1182231-1183230 Linum usitatissimum
Lus10032773.g 2.0kb upstream 2.0kb upstream 4411 true scaffold82: 1177820-1182230 Linum usitatissimum
Lus10032773.g 2.0kb upstream 2.0kb upstream 2000 false scaffold82: 1177820-1179819 Linum usitatissimum
Lus10032773.g 2.0kb downstream 2.0kb downstream 4411 true scaffold82: 1179820-1184230 Linum usitatissimum
Lus10032773.g 2.0kb downstream 2.0kb downstream 2000 false scaffold82: 1182231-1184230 Linum usitatissimum
Lus10032773.g 5.0kb upstream 5.0kb upstream 7411 true scaffold82: 1174820-1182230 Linum usitatissimum
Lus10032773.g 5.0kb upstream 5.0kb upstream 5000 false scaffold82: 1174820-1179819 Linum usitatissimum
Lus10032773.g 5.0kb downstream 5.0kb downstream 7411 true scaffold82: 1179820-1187230 Linum usitatissimum
Lus10032773.g 5.0kb downstream 5.0kb downstream 5000 false scaffold82: 1182231-1187230 Linum usitatissimum
Lus10032773.g 10.0kb upstream 10.0kb upstream 12411 true scaffold82: 1169820-1182230 Linum usitatissimum
Lus10032773.g 10.0kb upstream 10.0kb upstream 10000 false scaffold82: 1169820-1179819 Linum usitatissimum
Lus10032773.g 10.0kb downstream 10.0kb downstream 12411 true scaffold82: 1179820-1192230 Linum usitatissimum
Lus10032773.g 10.0kb downstream 10.0kb downstream 10000 false scaffold82: 1182231-1192230 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041140 5273 Angiosperm View MSA
122454923 5262 Malpighiales View MSA
124239628 5268 Malvidae View MSA
124067853 5270 Rosid View MSA
123747436 5271 Pentapetalae View MSA
122790144 5272 Eudicot View MSA
121344192 5274 Embryophyte View MSA
123424631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain