Gene : Lus10031537.g L. usitatissimum v1.0
Defline:  (1 of 3) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  188
Name:  ? Lus10031537.g Secondary Identifier:  ? PAC:23156004
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum CAROTENOID-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-5943 Linum usitatissimum pathologic  
Lusitatissimum PWY-5947 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10031537.g 0.5kb upstream 0.5kb upstream 3391 true scaffold863: 759697-763087 Linum usitatissimum
Lus10031537.g 0.5kb upstream 0.5kb upstream 500 false scaffold863: 759697-760196 Linum usitatissimum
Lus10031537.g 0.5kb downstream 0.5kb downstream 3391 true scaffold863: 760197-763587 Linum usitatissimum
Lus10031537.g 0.5kb downstream 0.5kb downstream 500 false scaffold863: 763088-763587 Linum usitatissimum
Lus10031537.g 1.0kb upstream 1.0kb upstream 3891 true scaffold863: 759197-763087 Linum usitatissimum
Lus10031537.g 1.0kb upstream 1.0kb upstream 1000 false scaffold863: 759197-760196 Linum usitatissimum
Lus10031537.g 1.0kb downstream 1.0kb downstream 3891 true scaffold863: 760197-764087 Linum usitatissimum
Lus10031537.g 1.0kb downstream 1.0kb downstream 1000 false scaffold863: 763088-764087 Linum usitatissimum
Lus10031537.g 2.0kb upstream 2.0kb upstream 4891 true scaffold863: 758197-763087 Linum usitatissimum
Lus10031537.g 2.0kb upstream 2.0kb upstream 2000 false scaffold863: 758197-760196 Linum usitatissimum
Lus10031537.g 2.0kb downstream 2.0kb downstream 4891 true scaffold863: 760197-765087 Linum usitatissimum
Lus10031537.g 2.0kb downstream 2.0kb downstream 2000 false scaffold863: 763088-765087 Linum usitatissimum
Lus10031537.g 5.0kb upstream 5.0kb upstream 7891 true scaffold863: 755197-763087 Linum usitatissimum
Lus10031537.g 5.0kb upstream 5.0kb upstream 5000 false scaffold863: 755197-760196 Linum usitatissimum
Lus10031537.g 5.0kb downstream 5.0kb downstream 7891 true scaffold863: 760197-768087 Linum usitatissimum
Lus10031537.g 5.0kb downstream 5.0kb downstream 5000 false scaffold863: 763088-768087 Linum usitatissimum
Lus10031537.g 10.0kb upstream 10.0kb upstream 12891 true scaffold863: 750197-763087 Linum usitatissimum
Lus10031537.g 10.0kb upstream 10.0kb upstream 10000 false scaffold863: 750197-760196 Linum usitatissimum
Lus10031537.g 10.0kb downstream 10.0kb downstream 12891 true scaffold863: 760197-773087 Linum usitatissimum
Lus10031537.g 10.0kb downstream 10.0kb downstream 10000 false scaffold863: 763088-773087 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457322 5262 Malpighiales View MSA
124238742 5268 Malvidae View MSA
124061081 5270 Rosid View MSA
123739346 5271 Pentapetalae View MSA
122787287 5272 Eudicot View MSA
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain