Gene : Lus10022004.g L. usitatissimum v1.0
Defline:  (1 of 3) 4.1.1.21 - Phosphoribosylaminoimidazole carboxylase / AIR carboxylase Genomic Order:  29
Name:  ? Lus10022004.g Secondary Identifier:  ? PAC:23160236
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-6124 Linum usitatissimum pathologic  
Lusitatissimum PWY-841 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10022004.g 0.5kb upstream 0.5kb upstream 3917 true scaffold87: 271772-275688 Linum usitatissimum
Lus10022004.g 0.5kb upstream 0.5kb upstream 500 false scaffold87: 271772-272271 Linum usitatissimum
Lus10022004.g 0.5kb downstream 0.5kb downstream 3917 true scaffold87: 272272-276188 Linum usitatissimum
Lus10022004.g 0.5kb downstream 0.5kb downstream 500 false scaffold87: 275689-276188 Linum usitatissimum
Lus10022004.g 1.0kb upstream 1.0kb upstream 4417 true scaffold87: 271272-275688 Linum usitatissimum
Lus10022004.g 1.0kb upstream 1.0kb upstream 1000 false scaffold87: 271272-272271 Linum usitatissimum
Lus10022004.g 1.0kb downstream 1.0kb downstream 4417 true scaffold87: 272272-276688 Linum usitatissimum
Lus10022004.g 1.0kb downstream 1.0kb downstream 1000 false scaffold87: 275689-276688 Linum usitatissimum
Lus10022004.g 2.0kb upstream 2.0kb upstream 5417 true scaffold87: 270272-275688 Linum usitatissimum
Lus10022004.g 2.0kb upstream 2.0kb upstream 2000 false scaffold87: 270272-272271 Linum usitatissimum
Lus10022004.g 2.0kb downstream 2.0kb downstream 5417 true scaffold87: 272272-277688 Linum usitatissimum
Lus10022004.g 2.0kb downstream 2.0kb downstream 2000 false scaffold87: 275689-277688 Linum usitatissimum
Lus10022004.g 5.0kb upstream 5.0kb upstream 8417 true scaffold87: 267272-275688 Linum usitatissimum
Lus10022004.g 5.0kb upstream 5.0kb upstream 5000 false scaffold87: 267272-272271 Linum usitatissimum
Lus10022004.g 5.0kb downstream 5.0kb downstream 8417 true scaffold87: 272272-280688 Linum usitatissimum
Lus10022004.g 5.0kb downstream 5.0kb downstream 5000 false scaffold87: 275689-280688 Linum usitatissimum
Lus10022004.g 10.0kb upstream 10.0kb upstream 13417 true scaffold87: 262272-275688 Linum usitatissimum
Lus10022004.g 10.0kb upstream 10.0kb upstream 10000 false scaffold87: 262272-272271 Linum usitatissimum
Lus10022004.g 10.0kb downstream 10.0kb downstream 13417 true scaffold87: 272272-285688 Linum usitatissimum
Lus10022004.g 10.0kb downstream 10.0kb downstream 10000 false scaffold87: 275689-285688 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458933 5262 Malpighiales View MSA
124251478 5268 Malvidae View MSA
124064893 5270 Rosid View MSA
123748384 5271 Pentapetalae View MSA
122790389 5272 Eudicot View MSA
122043847 5273 Angiosperm View MSA
121345366 5274 Embryophyte View MSA
123425127 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain