Gene : Lus10010450.g L. usitatissimum v1.0
Defline:  (1 of 3) PTHR11946//PTHR11946:SF78 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES Genomic Order:  48
Name:  ? Lus10010450.g Secondary Identifier:  ? PAC:23154100
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10010450.g 0.5kb upstream 0.5kb upstream 3948 true scaffold910: 173561-177508 Linum usitatissimum
Lus10010450.g 0.5kb upstream 0.5kb upstream 500 false scaffold910: 177009-177508 Linum usitatissimum
Lus10010450.g 0.5kb downstream 0.5kb downstream 3948 true scaffold910: 173061-177008 Linum usitatissimum
Lus10010450.g 0.5kb downstream 0.5kb downstream 500 false scaffold910: 173061-173560 Linum usitatissimum
Lus10010450.g 1.0kb upstream 1.0kb upstream 4448 true scaffold910: 173561-178008 Linum usitatissimum
Lus10010450.g 1.0kb upstream 1.0kb upstream 1000 false scaffold910: 177009-178008 Linum usitatissimum
Lus10010450.g 1.0kb downstream 1.0kb downstream 4448 true scaffold910: 172561-177008 Linum usitatissimum
Lus10010450.g 1.0kb downstream 1.0kb downstream 1000 false scaffold910: 172561-173560 Linum usitatissimum
Lus10010450.g 2.0kb upstream 2.0kb upstream 5448 true scaffold910: 173561-179008 Linum usitatissimum
Lus10010450.g 2.0kb upstream 2.0kb upstream 2000 false scaffold910: 177009-179008 Linum usitatissimum
Lus10010450.g 2.0kb downstream 2.0kb downstream 5448 true scaffold910: 171561-177008 Linum usitatissimum
Lus10010450.g 2.0kb downstream 2.0kb downstream 2000 false scaffold910: 171561-173560 Linum usitatissimum
Lus10010450.g 5.0kb upstream 5.0kb upstream 8448 true scaffold910: 173561-182008 Linum usitatissimum
Lus10010450.g 5.0kb upstream 5.0kb upstream 5000 false scaffold910: 177009-182008 Linum usitatissimum
Lus10010450.g 5.0kb downstream 5.0kb downstream 8448 true scaffold910: 168561-177008 Linum usitatissimum
Lus10010450.g 5.0kb downstream 5.0kb downstream 5000 false scaffold910: 168561-173560 Linum usitatissimum
Lus10010450.g 10.0kb upstream 10.0kb upstream 13448 true scaffold910: 173561-187008 Linum usitatissimum
Lus10010450.g 10.0kb upstream 10.0kb upstream 10000 false scaffold910: 177009-187008 Linum usitatissimum
Lus10010450.g 10.0kb downstream 10.0kb downstream 13448 true scaffold910: 163561-177008 Linum usitatissimum
Lus10010450.g 10.0kb downstream 10.0kb downstream 10000 false scaffold910: 163561-173560 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121562148 5273 Angiosperm Singleton cluster - no MSA
122423918 5262 Malpighiales Singleton cluster - no MSA
124215831 5268 Malvidae Singleton cluster - no MSA
123933374 5270 Rosid Singleton cluster - no MSA
123512507 5271 Pentapetalae Singleton cluster - no MSA
122547563 5272 Eudicot Singleton cluster - no MSA
120834722 5274 Embryophyte Singleton cluster - no MSA
122876046 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain