Gene : Lus10016603.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR23416:SF56 - SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Genomic Order:  28
Name:  ? Lus10016603.g Secondary Identifier:  ? PAC:23143962
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum CYSTSYN-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-6936 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10016603.g 0.5kb upstream 0.5kb upstream 1475 true scaffold915: 181189-182663 Linum usitatissimum
Lus10016603.g 0.5kb upstream 0.5kb upstream 500 false scaffold915: 182164-182663 Linum usitatissimum
Lus10016603.g 0.5kb downstream 0.5kb downstream 1475 true scaffold915: 180689-182163 Linum usitatissimum
Lus10016603.g 0.5kb downstream 0.5kb downstream 500 false scaffold915: 180689-181188 Linum usitatissimum
Lus10016603.g 1.0kb upstream 1.0kb upstream 1975 true scaffold915: 181189-183163 Linum usitatissimum
Lus10016603.g 1.0kb upstream 1.0kb upstream 1000 false scaffold915: 182164-183163 Linum usitatissimum
Lus10016603.g 1.0kb downstream 1.0kb downstream 1975 true scaffold915: 180189-182163 Linum usitatissimum
Lus10016603.g 1.0kb downstream 1.0kb downstream 1000 false scaffold915: 180189-181188 Linum usitatissimum
Lus10016603.g 2.0kb upstream 2.0kb upstream 2975 true scaffold915: 181189-184163 Linum usitatissimum
Lus10016603.g 2.0kb upstream 2.0kb upstream 2000 false scaffold915: 182164-184163 Linum usitatissimum
Lus10016603.g 2.0kb downstream 2.0kb downstream 2975 true scaffold915: 179189-182163 Linum usitatissimum
Lus10016603.g 2.0kb downstream 2.0kb downstream 2000 false scaffold915: 179189-181188 Linum usitatissimum
Lus10016603.g 5.0kb upstream 5.0kb upstream 5975 true scaffold915: 181189-187163 Linum usitatissimum
Lus10016603.g 5.0kb upstream 5.0kb upstream 5000 false scaffold915: 182164-187163 Linum usitatissimum
Lus10016603.g 5.0kb downstream 5.0kb downstream 5975 true scaffold915: 176189-182163 Linum usitatissimum
Lus10016603.g 5.0kb downstream 5.0kb downstream 5000 false scaffold915: 176189-181188 Linum usitatissimum
Lus10016603.g 10.0kb upstream 10.0kb upstream 10975 true scaffold915: 181189-192163 Linum usitatissimum
Lus10016603.g 10.0kb upstream 10.0kb upstream 10000 false scaffold915: 182164-192163 Linum usitatissimum
Lus10016603.g 10.0kb downstream 10.0kb downstream 10975 true scaffold915: 171189-182163 Linum usitatissimum
Lus10016603.g 10.0kb downstream 10.0kb downstream 10000 false scaffold915: 171189-181188 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457201 5262 Malpighiales View MSA
124238162 5268 Malvidae View MSA
124069334 5270 Rosid View MSA
123751427 5271 Pentapetalae View MSA
122788280 5272 Eudicot View MSA
122045055 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain