Gene : Lus10016623.g L. usitatissimum v1.0
Defline:  (1 of 15) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  48
Name:  ? Lus10016623.g Secondary Identifier:  ? PAC:23143952
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10016623.g 0.5kb upstream 0.5kb upstream 2075 true scaffold915: 291255-293329 Linum usitatissimum
Lus10016623.g 0.5kb upstream 0.5kb upstream 500 false scaffold915: 291255-291754 Linum usitatissimum
Lus10016623.g 0.5kb downstream 0.5kb downstream 2075 true scaffold915: 291755-293829 Linum usitatissimum
Lus10016623.g 0.5kb downstream 0.5kb downstream 500 false scaffold915: 293330-293829 Linum usitatissimum
Lus10016623.g 1.0kb upstream 1.0kb upstream 2575 true scaffold915: 290755-293329 Linum usitatissimum
Lus10016623.g 1.0kb upstream 1.0kb upstream 1000 false scaffold915: 290755-291754 Linum usitatissimum
Lus10016623.g 1.0kb downstream 1.0kb downstream 2575 true scaffold915: 291755-294329 Linum usitatissimum
Lus10016623.g 1.0kb downstream 1.0kb downstream 1000 false scaffold915: 293330-294329 Linum usitatissimum
Lus10016623.g 2.0kb upstream 2.0kb upstream 3575 true scaffold915: 289755-293329 Linum usitatissimum
Lus10016623.g 2.0kb upstream 2.0kb upstream 2000 false scaffold915: 289755-291754 Linum usitatissimum
Lus10016623.g 2.0kb downstream 2.0kb downstream 3575 true scaffold915: 291755-295329 Linum usitatissimum
Lus10016623.g 2.0kb downstream 2.0kb downstream 2000 false scaffold915: 293330-295329 Linum usitatissimum
Lus10016623.g 5.0kb upstream 5.0kb upstream 6575 true scaffold915: 286755-293329 Linum usitatissimum
Lus10016623.g 5.0kb upstream 5.0kb upstream 5000 false scaffold915: 286755-291754 Linum usitatissimum
Lus10016623.g 5.0kb downstream 5.0kb downstream 6575 true scaffold915: 291755-298329 Linum usitatissimum
Lus10016623.g 5.0kb downstream 5.0kb downstream 5000 false scaffold915: 293330-298329 Linum usitatissimum
Lus10016623.g 10.0kb upstream 10.0kb upstream 11575 true scaffold915: 281755-293329 Linum usitatissimum
Lus10016623.g 10.0kb upstream 10.0kb upstream 10000 false scaffold915: 281755-291754 Linum usitatissimum
Lus10016623.g 10.0kb downstream 10.0kb downstream 11575 true scaffold915: 291755-303329 Linum usitatissimum
Lus10016623.g 10.0kb downstream 10.0kb downstream 10000 false scaffold915: 293330-303329 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426544 5262 Malpighiales View MSA
124248769 5268 Malvidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain