Gene : Lus10030604.g L. usitatissimum v1.0
Defline:  (1 of 4) PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Genomic Order:  196
Name:  ? Lus10030604.g Secondary Identifier:  ? PAC:23140687
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-1081 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10030604.g 0.5kb upstream 0.5kb upstream 3514 true scaffold917: 948757-952270 Linum usitatissimum
Lus10030604.g 0.5kb upstream 0.5kb upstream 500 false scaffold917: 948757-949256 Linum usitatissimum
Lus10030604.g 0.5kb downstream 0.5kb downstream 3514 true scaffold917: 949257-952770 Linum usitatissimum
Lus10030604.g 0.5kb downstream 0.5kb downstream 500 false scaffold917: 952271-952770 Linum usitatissimum
Lus10030604.g 1.0kb upstream 1.0kb upstream 4014 true scaffold917: 948257-952270 Linum usitatissimum
Lus10030604.g 1.0kb upstream 1.0kb upstream 1000 false scaffold917: 948257-949256 Linum usitatissimum
Lus10030604.g 1.0kb downstream 1.0kb downstream 4014 true scaffold917: 949257-953270 Linum usitatissimum
Lus10030604.g 1.0kb downstream 1.0kb downstream 1000 false scaffold917: 952271-953270 Linum usitatissimum
Lus10030604.g 2.0kb upstream 2.0kb upstream 5014 true scaffold917: 947257-952270 Linum usitatissimum
Lus10030604.g 2.0kb upstream 2.0kb upstream 2000 false scaffold917: 947257-949256 Linum usitatissimum
Lus10030604.g 2.0kb downstream 2.0kb downstream 5014 true scaffold917: 949257-954270 Linum usitatissimum
Lus10030604.g 2.0kb downstream 2.0kb downstream 2000 false scaffold917: 952271-954270 Linum usitatissimum
Lus10030604.g 5.0kb upstream 5.0kb upstream 8014 true scaffold917: 944257-952270 Linum usitatissimum
Lus10030604.g 5.0kb upstream 5.0kb upstream 5000 false scaffold917: 944257-949256 Linum usitatissimum
Lus10030604.g 5.0kb downstream 5.0kb downstream 8014 true scaffold917: 949257-957270 Linum usitatissimum
Lus10030604.g 5.0kb downstream 5.0kb downstream 5000 false scaffold917: 952271-957270 Linum usitatissimum
Lus10030604.g 10.0kb upstream 10.0kb upstream 13014 true scaffold917: 939257-952270 Linum usitatissimum
Lus10030604.g 10.0kb upstream 10.0kb upstream 10000 false scaffold917: 939257-949256 Linum usitatissimum
Lus10030604.g 10.0kb downstream 10.0kb downstream 13014 true scaffold917: 949257-962270 Linum usitatissimum
Lus10030604.g 10.0kb downstream 10.0kb downstream 10000 false scaffold917: 952271-962270 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452540 5262 Malpighiales View MSA
124241872 5268 Malvidae View MSA
124069047 5270 Rosid View MSA
123746876 5271 Pentapetalae View MSA
122793930 5272 Eudicot View MSA
122049793 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain