Gene : Lus10001050.g L. usitatissimum v1.0
Defline:  (1 of 2) KOG1459 - Squalene synthetase Genomic Order:  8
Name:  ? Lus10001050.g Secondary Identifier:  ? PAC:23178120
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum CAROTENOID-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-6475 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10001050.g 0.5kb upstream 0.5kb upstream 2497 true scaffold964: 24886-27382 Linum usitatissimum
Lus10001050.g 0.5kb upstream 0.5kb upstream 500 false scaffold964: 26883-27382 Linum usitatissimum
Lus10001050.g 0.5kb downstream 0.5kb downstream 2497 true scaffold964: 24386-26882 Linum usitatissimum
Lus10001050.g 0.5kb downstream 0.5kb downstream 500 false scaffold964: 24386-24885 Linum usitatissimum
Lus10001050.g 1.0kb upstream 1.0kb upstream 2997 true scaffold964: 24886-27882 Linum usitatissimum
Lus10001050.g 1.0kb upstream 1.0kb upstream 1000 false scaffold964: 26883-27882 Linum usitatissimum
Lus10001050.g 1.0kb downstream 1.0kb downstream 2997 true scaffold964: 23886-26882 Linum usitatissimum
Lus10001050.g 1.0kb downstream 1.0kb downstream 1000 false scaffold964: 23886-24885 Linum usitatissimum
Lus10001050.g 2.0kb upstream 2.0kb upstream 3997 true scaffold964: 24886-28882 Linum usitatissimum
Lus10001050.g 2.0kb upstream 2.0kb upstream 2000 false scaffold964: 26883-28882 Linum usitatissimum
Lus10001050.g 2.0kb downstream 2.0kb downstream 3997 true scaffold964: 22886-26882 Linum usitatissimum
Lus10001050.g 2.0kb downstream 2.0kb downstream 2000 false scaffold964: 22886-24885 Linum usitatissimum
Lus10001050.g 5.0kb upstream 5.0kb upstream 6997 true scaffold964: 24886-31882 Linum usitatissimum
Lus10001050.g 5.0kb upstream 5.0kb upstream 5000 false scaffold964: 26883-31882 Linum usitatissimum
Lus10001050.g 5.0kb downstream 5.0kb downstream 6997 true scaffold964: 19886-26882 Linum usitatissimum
Lus10001050.g 5.0kb downstream 5.0kb downstream 5000 false scaffold964: 19886-24885 Linum usitatissimum
Lus10001050.g 10.0kb upstream 10.0kb upstream 11997 true scaffold964: 24886-36882 Linum usitatissimum
Lus10001050.g 10.0kb upstream 10.0kb upstream 10000 false scaffold964: 26883-36882 Linum usitatissimum
Lus10001050.g 10.0kb downstream 10.0kb downstream 11997 true scaffold964: 14886-26882 Linum usitatissimum
Lus10001050.g 10.0kb downstream 10.0kb downstream 10000 false scaffold964: 14886-24885 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122463216 5262 Malpighiales View MSA
124251202 5268 Malvidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain