Gene : Lus10023319.g L. usitatissimum v1.0
Defline:  (1 of 4) PTHR12526:SF304 - STARCH SYNTHASE 4, CHLOROPLASTIC/AMYLOPLASTIC-RELATED Genomic Order:  119
Name:  ? Lus10023319.g Secondary Identifier:  ? PAC:23180996
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum GLYCOGENSYNTH-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-622 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10023319.g 0.5kb upstream 0.5kb upstream 5561 true scaffold98: 528086-533646 Linum usitatissimum
Lus10023319.g 0.5kb upstream 0.5kb upstream 500 false scaffold98: 528086-528585 Linum usitatissimum
Lus10023319.g 0.5kb downstream 0.5kb downstream 5561 true scaffold98: 528586-534146 Linum usitatissimum
Lus10023319.g 0.5kb downstream 0.5kb downstream 500 false scaffold98: 533647-534146 Linum usitatissimum
Lus10023319.g 1.0kb upstream 1.0kb upstream 6061 true scaffold98: 527586-533646 Linum usitatissimum
Lus10023319.g 1.0kb upstream 1.0kb upstream 1000 false scaffold98: 527586-528585 Linum usitatissimum
Lus10023319.g 1.0kb downstream 1.0kb downstream 6061 true scaffold98: 528586-534646 Linum usitatissimum
Lus10023319.g 1.0kb downstream 1.0kb downstream 1000 false scaffold98: 533647-534646 Linum usitatissimum
Lus10023319.g 2.0kb upstream 2.0kb upstream 7061 true scaffold98: 526586-533646 Linum usitatissimum
Lus10023319.g 2.0kb upstream 2.0kb upstream 2000 false scaffold98: 526586-528585 Linum usitatissimum
Lus10023319.g 2.0kb downstream 2.0kb downstream 7061 true scaffold98: 528586-535646 Linum usitatissimum
Lus10023319.g 2.0kb downstream 2.0kb downstream 2000 false scaffold98: 533647-535646 Linum usitatissimum
Lus10023319.g 5.0kb upstream 5.0kb upstream 10061 true scaffold98: 523586-533646 Linum usitatissimum
Lus10023319.g 5.0kb upstream 5.0kb upstream 5000 false scaffold98: 523586-528585 Linum usitatissimum
Lus10023319.g 5.0kb downstream 5.0kb downstream 10061 true scaffold98: 528586-538646 Linum usitatissimum
Lus10023319.g 5.0kb downstream 5.0kb downstream 5000 false scaffold98: 533647-538646 Linum usitatissimum
Lus10023319.g 10.0kb upstream 10.0kb upstream 15061 true scaffold98: 518586-533646 Linum usitatissimum
Lus10023319.g 10.0kb upstream 10.0kb upstream 10000 false scaffold98: 518586-528585 Linum usitatissimum
Lus10023319.g 10.0kb downstream 10.0kb downstream 15061 true scaffold98: 528586-543646 Linum usitatissimum
Lus10023319.g 10.0kb downstream 10.0kb downstream 10000 false scaffold98: 533647-543646 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453603 5262 Malpighiales View MSA
124243663 5268 Malvidae View MSA
124062542 5270 Rosid View MSA
123737586 5271 Pentapetalae View MSA
122786746 5272 Eudicot View MSA
122042885 5273 Angiosperm View MSA
121344527 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain