Gene : Lus10009422.g L. usitatissimum v1.0
Defline:  (1 of 30) KOG0417 - Ubiquitin-protein ligase Genomic Order:  5
Name:  ? Lus10009422.g Secondary Identifier:  ? PAC:23149678
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10009422.g 0.5kb upstream 0.5kb upstream 1447 true scaffold981: 30232-31678 Linum usitatissimum
Lus10009422.g 0.5kb upstream 0.5kb upstream 500 false scaffold981: 31179-31678 Linum usitatissimum
Lus10009422.g 0.5kb downstream 0.5kb downstream 1447 true scaffold981: 29732-31178 Linum usitatissimum
Lus10009422.g 0.5kb downstream 0.5kb downstream 500 false scaffold981: 29732-30231 Linum usitatissimum
Lus10009422.g 1.0kb upstream 1.0kb upstream 1947 true scaffold981: 30232-32178 Linum usitatissimum
Lus10009422.g 1.0kb upstream 1.0kb upstream 1000 false scaffold981: 31179-32178 Linum usitatissimum
Lus10009422.g 1.0kb downstream 1.0kb downstream 1947 true scaffold981: 29232-31178 Linum usitatissimum
Lus10009422.g 1.0kb downstream 1.0kb downstream 1000 false scaffold981: 29232-30231 Linum usitatissimum
Lus10009422.g 2.0kb upstream 2.0kb upstream 2947 true scaffold981: 30232-33178 Linum usitatissimum
Lus10009422.g 2.0kb upstream 2.0kb upstream 2000 false scaffold981: 31179-33178 Linum usitatissimum
Lus10009422.g 2.0kb downstream 2.0kb downstream 2947 true scaffold981: 28232-31178 Linum usitatissimum
Lus10009422.g 2.0kb downstream 2.0kb downstream 2000 false scaffold981: 28232-30231 Linum usitatissimum
Lus10009422.g 5.0kb upstream 5.0kb upstream 5947 true scaffold981: 30232-36178 Linum usitatissimum
Lus10009422.g 5.0kb upstream 5.0kb upstream 5000 false scaffold981: 31179-36178 Linum usitatissimum
Lus10009422.g 5.0kb downstream 5.0kb downstream 5947 true scaffold981: 25232-31178 Linum usitatissimum
Lus10009422.g 5.0kb downstream 5.0kb downstream 5000 false scaffold981: 25232-30231 Linum usitatissimum
Lus10009422.g 10.0kb upstream 10.0kb upstream 10947 true scaffold981: 30232-41178 Linum usitatissimum
Lus10009422.g 10.0kb upstream 10.0kb upstream 10000 false scaffold981: 31179-41178 Linum usitatissimum
Lus10009422.g 10.0kb downstream 10.0kb downstream 10947 true scaffold981: 20232-31178 Linum usitatissimum
Lus10009422.g 10.0kb downstream 10.0kb downstream 10000 false scaffold981: 20232-30231 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458247 5262 Malpighiales View MSA
124253903 5268 Malvidae View MSA
124072408 5270 Rosid View MSA
123751143 5271 Pentapetalae View MSA
122796795 5272 Eudicot View MSA
122049643 5273 Angiosperm View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain