Gene : Lus10000221.g L. usitatissimum v1.0
Defline:  (1 of 3) PTHR13789:SF207 - LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC Genomic Order:  1
Name:  ? Lus10000221.g Secondary Identifier:  ? PAC:23162268
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum CAROTENOID-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-5175 Linum usitatissimum pathologic  
Lusitatissimum PWY-5946 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10000221.g 0.5kb upstream 0.5kb upstream 3012 true C8378741: 509-3520 Linum usitatissimum
Lus10000221.g 0.5kb upstream 0.5kb upstream 109 false C8378741: 3412-3520 Linum usitatissimum
Lus10000221.g 0.5kb downstream 0.5kb downstream 3403 true C8378741: 9-3411 Linum usitatissimum
Lus10000221.g 0.5kb downstream 0.5kb downstream 500 false C8378741: 9-508 Linum usitatissimum
Lus10000221.g 1.0kb upstream 1.0kb upstream 3012 true C8378741: 509-3520 Linum usitatissimum
Lus10000221.g 1.0kb upstream 1.0kb upstream 109 false C8378741: 3412-3520 Linum usitatissimum
Lus10000221.g 1.0kb downstream 1.0kb downstream 3411 true C8378741: 1-3411 Linum usitatissimum
Lus10000221.g 1.0kb downstream 1.0kb downstream 508 false C8378741: 1-508 Linum usitatissimum
Lus10000221.g 2.0kb upstream 2.0kb upstream 3012 true C8378741: 509-3520 Linum usitatissimum
Lus10000221.g 2.0kb upstream 2.0kb upstream 109 false C8378741: 3412-3520 Linum usitatissimum
Lus10000221.g 2.0kb downstream 2.0kb downstream 3411 true C8378741: 1-3411 Linum usitatissimum
Lus10000221.g 2.0kb downstream 2.0kb downstream 508 false C8378741: 1-508 Linum usitatissimum
Lus10000221.g 5.0kb upstream 5.0kb upstream 3012 true C8378741: 509-3520 Linum usitatissimum
Lus10000221.g 5.0kb upstream 5.0kb upstream 109 false C8378741: 3412-3520 Linum usitatissimum
Lus10000221.g 5.0kb downstream 5.0kb downstream 3411 true C8378741: 1-3411 Linum usitatissimum
Lus10000221.g 5.0kb downstream 5.0kb downstream 508 false C8378741: 1-508 Linum usitatissimum
Lus10000221.g 10.0kb upstream 10.0kb upstream 3012 true C8378741: 509-3520 Linum usitatissimum
Lus10000221.g 10.0kb upstream 10.0kb upstream 109 false C8378741: 3412-3520 Linum usitatissimum
Lus10000221.g 10.0kb downstream 10.0kb downstream 3411 true C8378741: 1-3411 Linum usitatissimum
Lus10000221.g 10.0kb downstream 10.0kb downstream 508 false C8378741: 1-508 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122414896 5262 Malpighiales Singleton cluster - no MSA
124207942 5268 Malvidae Singleton cluster - no MSA
123926490 5270 Rosid Singleton cluster - no MSA
123749598 5271 Pentapetalae View MSA
122795342 5272 Eudicot View MSA
122048987 5273 Angiosperm View MSA
121311196 5274 Embryophyte View MSA
123348524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain