Gene : Lus10014563.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11538:SF40 - PHENYLALANINE--TRNA LIGASE ALPHA SUBUNIT Genomic Order:  69
Name:  ? Lus10014563.g Secondary Identifier:  ? PAC:23170921
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10014563.g 0.5kb upstream 0.5kb upstream 5856 true scaffold107: 311934-317789 Linum usitatissimum
Lus10014563.g 0.5kb upstream 0.5kb upstream 500 false scaffold107: 317290-317789 Linum usitatissimum
Lus10014563.g 0.5kb downstream 0.5kb downstream 5856 true scaffold107: 311434-317289 Linum usitatissimum
Lus10014563.g 0.5kb downstream 0.5kb downstream 500 false scaffold107: 311434-311933 Linum usitatissimum
Lus10014563.g 1.0kb upstream 1.0kb upstream 6356 true scaffold107: 311934-318289 Linum usitatissimum
Lus10014563.g 1.0kb upstream 1.0kb upstream 1000 false scaffold107: 317290-318289 Linum usitatissimum
Lus10014563.g 1.0kb downstream 1.0kb downstream 6356 true scaffold107: 310934-317289 Linum usitatissimum
Lus10014563.g 1.0kb downstream 1.0kb downstream 1000 false scaffold107: 310934-311933 Linum usitatissimum
Lus10014563.g 2.0kb upstream 2.0kb upstream 7356 true scaffold107: 311934-319289 Linum usitatissimum
Lus10014563.g 2.0kb upstream 2.0kb upstream 2000 false scaffold107: 317290-319289 Linum usitatissimum
Lus10014563.g 2.0kb downstream 2.0kb downstream 7356 true scaffold107: 309934-317289 Linum usitatissimum
Lus10014563.g 2.0kb downstream 2.0kb downstream 2000 false scaffold107: 309934-311933 Linum usitatissimum
Lus10014563.g 5.0kb upstream 5.0kb upstream 10356 true scaffold107: 311934-322289 Linum usitatissimum
Lus10014563.g 5.0kb upstream 5.0kb upstream 5000 false scaffold107: 317290-322289 Linum usitatissimum
Lus10014563.g 5.0kb downstream 5.0kb downstream 10356 true scaffold107: 306934-317289 Linum usitatissimum
Lus10014563.g 5.0kb downstream 5.0kb downstream 5000 false scaffold107: 306934-311933 Linum usitatissimum
Lus10014563.g 10.0kb upstream 10.0kb upstream 15356 true scaffold107: 311934-327289 Linum usitatissimum
Lus10014563.g 10.0kb upstream 10.0kb upstream 10000 false scaffold107: 317290-327289 Linum usitatissimum
Lus10014563.g 10.0kb downstream 10.0kb downstream 15356 true scaffold107: 301934-317289 Linum usitatissimum
Lus10014563.g 10.0kb downstream 10.0kb downstream 10000 false scaffold107: 301934-311933 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040985 5273 Angiosperm View MSA
122384831 5262 Malpighiales View MSA
124242019 5268 Malvidae View MSA
124067851 5270 Rosid View MSA
123744864 5271 Pentapetalae View MSA
122791100 5272 Eudicot View MSA
121346168 5274 Embryophyte View MSA
123424573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain