Gene : Lus10003337.g L. usitatissimum v1.0
Defline:  (1 of 4) 6.1.1.7 - Alanine--tRNA ligase / Alanyl-tRNA synthetase Genomic Order:  20
Name:  ? Lus10003337.g Secondary Identifier:  ? PAC:23148035
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10003337.g 0.5kb upstream 0.5kb upstream 5253 true scaffold1120: 74583-79835 Linum usitatissimum
Lus10003337.g 0.5kb upstream 0.5kb upstream 500 false scaffold1120: 79336-79835 Linum usitatissimum
Lus10003337.g 0.5kb downstream 0.5kb downstream 5253 true scaffold1120: 74083-79335 Linum usitatissimum
Lus10003337.g 0.5kb downstream 0.5kb downstream 500 false scaffold1120: 74083-74582 Linum usitatissimum
Lus10003337.g 1.0kb upstream 1.0kb upstream 5753 true scaffold1120: 74583-80335 Linum usitatissimum
Lus10003337.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1120: 79336-80335 Linum usitatissimum
Lus10003337.g 1.0kb downstream 1.0kb downstream 5753 true scaffold1120: 73583-79335 Linum usitatissimum
Lus10003337.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1120: 73583-74582 Linum usitatissimum
Lus10003337.g 2.0kb upstream 2.0kb upstream 6753 true scaffold1120: 74583-81335 Linum usitatissimum
Lus10003337.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1120: 79336-81335 Linum usitatissimum
Lus10003337.g 2.0kb downstream 2.0kb downstream 6753 true scaffold1120: 72583-79335 Linum usitatissimum
Lus10003337.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1120: 72583-74582 Linum usitatissimum
Lus10003337.g 5.0kb upstream 5.0kb upstream 9753 true scaffold1120: 74583-84335 Linum usitatissimum
Lus10003337.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1120: 79336-84335 Linum usitatissimum
Lus10003337.g 5.0kb downstream 5.0kb downstream 9753 true scaffold1120: 69583-79335 Linum usitatissimum
Lus10003337.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1120: 69583-74582 Linum usitatissimum
Lus10003337.g 10.0kb upstream 10.0kb upstream 14753 true scaffold1120: 74583-89335 Linum usitatissimum
Lus10003337.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1120: 79336-89335 Linum usitatissimum
Lus10003337.g 10.0kb downstream 10.0kb downstream 14753 true scaffold1120: 64583-79335 Linum usitatissimum
Lus10003337.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1120: 64583-74582 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454972 5262 Malpighiales View MSA
124242500 5268 Malvidae View MSA
124064161 5270 Rosid View MSA
123740814 5271 Pentapetalae View MSA
122788872 5272 Eudicot View MSA
122048095 5273 Angiosperm View MSA
121348703 5274 Embryophyte View MSA
123425032 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain