Gene : Lus10011062.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR35695:SF1 - GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  79
Name:  ? Lus10011062.g Secondary Identifier:  ? PAC:23148671
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY0-1319 Linum usitatissimum pathologic  
Lusitatissimum PWY4FS-7 Linum usitatissimum pathologic  
Lusitatissimum PWY-7411 Linum usitatissimum pathologic  
Lusitatissimum TRIGLSYN-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10011062.g 0.5kb upstream 0.5kb upstream 4681 true scaffold1035: 392368-397048 Linum usitatissimum
Lus10011062.g 0.5kb upstream 0.5kb upstream 500 false scaffold1035: 392368-392867 Linum usitatissimum
Lus10011062.g 0.5kb downstream 0.5kb downstream 4681 true scaffold1035: 392868-397548 Linum usitatissimum
Lus10011062.g 0.5kb downstream 0.5kb downstream 500 false scaffold1035: 397049-397548 Linum usitatissimum
Lus10011062.g 1.0kb upstream 1.0kb upstream 5181 true scaffold1035: 391868-397048 Linum usitatissimum
Lus10011062.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1035: 391868-392867 Linum usitatissimum
Lus10011062.g 1.0kb downstream 1.0kb downstream 5181 true scaffold1035: 392868-398048 Linum usitatissimum
Lus10011062.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1035: 397049-398048 Linum usitatissimum
Lus10011062.g 2.0kb upstream 2.0kb upstream 6181 true scaffold1035: 390868-397048 Linum usitatissimum
Lus10011062.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1035: 390868-392867 Linum usitatissimum
Lus10011062.g 2.0kb downstream 2.0kb downstream 6181 true scaffold1035: 392868-399048 Linum usitatissimum
Lus10011062.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1035: 397049-399048 Linum usitatissimum
Lus10011062.g 5.0kb upstream 5.0kb upstream 9181 true scaffold1035: 387868-397048 Linum usitatissimum
Lus10011062.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1035: 387868-392867 Linum usitatissimum
Lus10011062.g 5.0kb downstream 5.0kb downstream 9181 true scaffold1035: 392868-402048 Linum usitatissimum
Lus10011062.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1035: 397049-402048 Linum usitatissimum
Lus10011062.g 10.0kb upstream 10.0kb upstream 14181 true scaffold1035: 382868-397048 Linum usitatissimum
Lus10011062.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1035: 382868-392867 Linum usitatissimum
Lus10011062.g 10.0kb downstream 10.0kb downstream 14181 true scaffold1035: 392868-407048 Linum usitatissimum
Lus10011062.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1035: 397049-407048 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459896 5262 Malpighiales View MSA
124237603 5268 Malvidae View MSA
124061873 5270 Rosid View MSA
123741043 5271 Pentapetalae View MSA
122789862 5272 Eudicot View MSA
122046647 5273 Angiosperm View MSA
121346869 5274 Embryophyte View MSA
123424445 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain