Gene : Lus10002143.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR34803:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC Genomic Order:  12
Name:  ? Lus10002143.g Secondary Identifier:  ? PAC:23181303
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PHOTOALL-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-101 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10002143.g 0.5kb upstream 0.5kb upstream 1338 true scaffold1106: 61890-63227 Linum usitatissimum
Lus10002143.g 0.5kb upstream 0.5kb upstream 500 false scaffold1106: 62728-63227 Linum usitatissimum
Lus10002143.g 0.5kb downstream 0.5kb downstream 1338 true scaffold1106: 61390-62727 Linum usitatissimum
Lus10002143.g 0.5kb downstream 0.5kb downstream 500 false scaffold1106: 61390-61889 Linum usitatissimum
Lus10002143.g 1.0kb upstream 1.0kb upstream 1838 true scaffold1106: 61890-63727 Linum usitatissimum
Lus10002143.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1106: 62728-63727 Linum usitatissimum
Lus10002143.g 1.0kb downstream 1.0kb downstream 1838 true scaffold1106: 60890-62727 Linum usitatissimum
Lus10002143.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1106: 60890-61889 Linum usitatissimum
Lus10002143.g 2.0kb upstream 2.0kb upstream 2838 true scaffold1106: 61890-64727 Linum usitatissimum
Lus10002143.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1106: 62728-64727 Linum usitatissimum
Lus10002143.g 2.0kb downstream 2.0kb downstream 2838 true scaffold1106: 59890-62727 Linum usitatissimum
Lus10002143.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1106: 59890-61889 Linum usitatissimum
Lus10002143.g 5.0kb upstream 5.0kb upstream 5838 true scaffold1106: 61890-67727 Linum usitatissimum
Lus10002143.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1106: 62728-67727 Linum usitatissimum
Lus10002143.g 5.0kb downstream 5.0kb downstream 5838 true scaffold1106: 56890-62727 Linum usitatissimum
Lus10002143.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1106: 56890-61889 Linum usitatissimum
Lus10002143.g 10.0kb upstream 10.0kb upstream 10838 true scaffold1106: 61890-72727 Linum usitatissimum
Lus10002143.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1106: 62728-72727 Linum usitatissimum
Lus10002143.g 10.0kb downstream 10.0kb downstream 10838 true scaffold1106: 51890-62727 Linum usitatissimum
Lus10002143.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1106: 51890-61889 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
122454121 5262 Malpighiales View MSA
124243038 5268 Malvidae View MSA
124061167 5270 Rosid View MSA
123750401 5271 Pentapetalae View MSA
122793402 5272 Eudicot View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain