Gene : Lus10003712.g L. usitatissimum v1.0
Defline:  (1 of 4) PTHR22573:SF47 - PHOSPHOGLUCOMUTASE, CYTOPLASMIC 1-RELATED Genomic Order:  36
Name:  ? Lus10003712.g Secondary Identifier:  ? PAC:23179484
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum GLUCOSE1PMETAB-PWY Linum usitatissimum pathologic  
Lusitatissimum GLYCOGENSYNTH-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-3801 Linum usitatissimum pathologic  
Lusitatissimum PWY-5661 Linum usitatissimum pathologic  
Lusitatissimum PWY-622 Linum usitatissimum pathologic  
Lusitatissimum PWY66-422 Linum usitatissimum pathologic  
Lusitatissimum PWY-7238 Linum usitatissimum pathologic  
Lusitatissimum PWY-7343 Linum usitatissimum pathologic  
Lusitatissimum SUCSYN-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10003712.g 0.5kb upstream 0.5kb upstream 4803 true scaffold1042: 134696-139498 Linum usitatissimum
Lus10003712.g 0.5kb upstream 0.5kb upstream 500 false scaffold1042: 134696-135195 Linum usitatissimum
Lus10003712.g 0.5kb downstream 0.5kb downstream 4803 true scaffold1042: 135196-139998 Linum usitatissimum
Lus10003712.g 0.5kb downstream 0.5kb downstream 500 false scaffold1042: 139499-139998 Linum usitatissimum
Lus10003712.g 1.0kb upstream 1.0kb upstream 5303 true scaffold1042: 134196-139498 Linum usitatissimum
Lus10003712.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1042: 134196-135195 Linum usitatissimum
Lus10003712.g 1.0kb downstream 1.0kb downstream 5303 true scaffold1042: 135196-140498 Linum usitatissimum
Lus10003712.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1042: 139499-140498 Linum usitatissimum
Lus10003712.g 2.0kb upstream 2.0kb upstream 6303 true scaffold1042: 133196-139498 Linum usitatissimum
Lus10003712.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1042: 133196-135195 Linum usitatissimum
Lus10003712.g 2.0kb downstream 2.0kb downstream 6303 true scaffold1042: 135196-141498 Linum usitatissimum
Lus10003712.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1042: 139499-141498 Linum usitatissimum
Lus10003712.g 5.0kb upstream 5.0kb upstream 9303 true scaffold1042: 130196-139498 Linum usitatissimum
Lus10003712.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1042: 130196-135195 Linum usitatissimum
Lus10003712.g 5.0kb downstream 5.0kb downstream 9303 true scaffold1042: 135196-144498 Linum usitatissimum
Lus10003712.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1042: 139499-144498 Linum usitatissimum
Lus10003712.g 10.0kb upstream 10.0kb upstream 14303 true scaffold1042: 125196-139498 Linum usitatissimum
Lus10003712.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1042: 125196-135195 Linum usitatissimum
Lus10003712.g 10.0kb downstream 10.0kb downstream 14303 true scaffold1042: 135196-149498 Linum usitatissimum
Lus10003712.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1042: 139499-149498 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456236 5262 Malpighiales View MSA
124253593 5268 Malvidae View MSA
124065382 5270 Rosid View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain