Gene : Lus10002125.g L. usitatissimum v1.0
Defline:  (1 of 9) PTHR31375:SF2 - POLYGALACTURONASE/PECTINASE Genomic Order:  21
Name:  ? Lus10002125.g Secondary Identifier:  ? PAC:23166362
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-1081 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10002125.g 0.5kb upstream 0.5kb upstream 2152 true scaffold1052: 87674-89825 Linum usitatissimum
Lus10002125.g 0.5kb upstream 0.5kb upstream 500 false scaffold1052: 87674-88173 Linum usitatissimum
Lus10002125.g 0.5kb downstream 0.5kb downstream 2152 true scaffold1052: 88174-90325 Linum usitatissimum
Lus10002125.g 0.5kb downstream 0.5kb downstream 500 false scaffold1052: 89826-90325 Linum usitatissimum
Lus10002125.g 1.0kb upstream 1.0kb upstream 2652 true scaffold1052: 87174-89825 Linum usitatissimum
Lus10002125.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1052: 87174-88173 Linum usitatissimum
Lus10002125.g 1.0kb downstream 1.0kb downstream 2652 true scaffold1052: 88174-90825 Linum usitatissimum
Lus10002125.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1052: 89826-90825 Linum usitatissimum
Lus10002125.g 2.0kb upstream 2.0kb upstream 3652 true scaffold1052: 86174-89825 Linum usitatissimum
Lus10002125.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1052: 86174-88173 Linum usitatissimum
Lus10002125.g 2.0kb downstream 2.0kb downstream 3652 true scaffold1052: 88174-91825 Linum usitatissimum
Lus10002125.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1052: 89826-91825 Linum usitatissimum
Lus10002125.g 5.0kb upstream 5.0kb upstream 6652 true scaffold1052: 83174-89825 Linum usitatissimum
Lus10002125.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1052: 83174-88173 Linum usitatissimum
Lus10002125.g 5.0kb downstream 5.0kb downstream 6652 true scaffold1052: 88174-94825 Linum usitatissimum
Lus10002125.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1052: 89826-94825 Linum usitatissimum
Lus10002125.g 10.0kb upstream 10.0kb upstream 11652 true scaffold1052: 78174-89825 Linum usitatissimum
Lus10002125.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1052: 78174-88173 Linum usitatissimum
Lus10002125.g 10.0kb downstream 10.0kb downstream 11652 true scaffold1052: 88174-99825 Linum usitatissimum
Lus10002125.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1052: 89826-99825 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448227 5262 Malpighiales View MSA
124252972 5268 Malvidae View MSA
124060937 5270 Rosid View MSA
123747300 5271 Pentapetalae View MSA
122794998 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain