Gene : Brdisv1BdTR12c1042176m.g B. distachyon BdTR12c v1
Defline:  (1 of 1) PTHR10277//PTHR10277:SF28 - HOMOCITRATE SYNTHASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1577
Name:  ? Brdisv1BdTR12c1042176m.g Secondary Identifier:  ? PAC:34403690
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BdistachyonBdTR12c BRANCHED-CHAIN-AA-SYN-PWY Brachypodium distachyon BdTR12c pathologic  
BdistachyonBdTR12c LEUSYN-PWY Brachypodium distachyon BdTR12c pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brdisv1BdTR12c1042176m.g 0.5kb upstream 0.5kb upstream 2186 true pseudomolecule_8: 18677052-18679237 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 0.5kb upstream 0.5kb upstream 500 false pseudomolecule_8: 18678738-18679237 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 0.5kb downstream 0.5kb downstream 2186 true pseudomolecule_8: 18676552-18678737 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 0.5kb downstream 0.5kb downstream 500 false pseudomolecule_8: 18676552-18677051 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 1.0kb upstream 1.0kb upstream 2686 true pseudomolecule_8: 18677052-18679737 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 1.0kb upstream 1.0kb upstream 1000 false pseudomolecule_8: 18678738-18679737 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 1.0kb downstream 1.0kb downstream 2686 true pseudomolecule_8: 18676052-18678737 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 1.0kb downstream 1.0kb downstream 1000 false pseudomolecule_8: 18676052-18677051 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 2.0kb upstream 2.0kb upstream 3686 true pseudomolecule_8: 18677052-18680737 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 2.0kb upstream 2.0kb upstream 2000 false pseudomolecule_8: 18678738-18680737 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 2.0kb downstream 2.0kb downstream 3686 true pseudomolecule_8: 18675052-18678737 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 2.0kb downstream 2.0kb downstream 2000 false pseudomolecule_8: 18675052-18677051 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 5.0kb upstream 5.0kb upstream 6686 true pseudomolecule_8: 18677052-18683737 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 5.0kb upstream 5.0kb upstream 5000 false pseudomolecule_8: 18678738-18683737 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 5.0kb downstream 5.0kb downstream 6686 true pseudomolecule_8: 18672052-18678737 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 5.0kb downstream 5.0kb downstream 5000 false pseudomolecule_8: 18672052-18677051 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 10.0kb upstream 10.0kb upstream 11686 true pseudomolecule_8: 18677052-18688737 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 10.0kb upstream 10.0kb upstream 10000 false pseudomolecule_8: 18678738-18688737 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 10.0kb downstream 10.0kb downstream 11686 true pseudomolecule_8: 18667052-18678737 Brachypodium distachyon BdTR12c
Brdisv1BdTR12c1042176m.g 10.0kb downstream 10.0kb downstream 10000 false pseudomolecule_8: 18667052-18677051 Brachypodium distachyon BdTR12c

1 Protein Family

Cluster ID Method ID Method Name Sequence Alignment
66134848 5043 BrachyPan Singleton cluster - no MSA

0 Rna Seq Expressions

1 Strain

DB identifier