Protein Domain : IPR009013

Type:  Domain Name:  Attachment protein shaft domain
Description:  The attachment proteins in adenoviruses and reoviruses display structural similarity, indicating similar cell-surface receptor binding strategies, even though these viruses differ from one another in design, capsid composition and genome composition [, ]. The dsDNA adenoviruses are responsible for diseases such as pneumonia, cystitis, conjunctivitis and diarrhoea, all of which can be fatal to patients who are immunocompromised, while the dsRNA reoviruses are responsible for mild respiratory or gastrointestinal infections. The attachment proteins play a pivotal role in disease patterns through their selective recognition of cell-surface receptors. The fibre protein and the sigma 1 protein act as attachment proteins in adenoviruses and reoviruses, respectively. The attachment proteins are homo-trimeric, and contain a long, thin central shaft, or tail domain, and a C-terminal head domain that plays an important role in cell attachment. The structure of the shaft or tail domain reveals a triple beta-spiral that is formed by interlocking beta-hairpin repeat units. Short Name:  Attachment_protein_shaft_dom
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0 Child Features

0 Contains

2 Cross Referencess

Identifier
G3DSA:2.10.25.20
SSF51225

2 Found Ins

DB identifier Type Name
IPR002592 Family Viral attachment sigma 1, reoviral
IPR000931 Family Adenovirus fibre protein

3 GO Annotations

GO Term Gene Name
GO:0007155 IPR009013
GO:0019058 IPR009013
GO:0019062 IPR009013

3 Ontology Annotations

GO Term Gene Name
GO:0007155 IPR009013
GO:0019058 IPR009013
GO:0019062 IPR009013

0 Parent Features

91 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
Lus10023756 PAC:23151435 Linum usitatissimum 172  
Potri.010G242400.1 A0A2K1YZI3 PAC:26979838 Populus trichocarpa 81  
Potri.010G231200.1 B9HUW1 PAC:26979178 Populus trichocarpa 184  
Potri.010G231200.2 B9HUW1 PAC:26979177 Populus trichocarpa 184  
Gorai.007G369600.1 A0A0D2R555 PAC:26780946 Gossypium raimondii 173  
Thecc1EG005117t1 A0A061E0B6 PAC:27431407 Theobroma cacao 481  
Cagra.0612s0086.1.p PAC:28917540 Capsella grandiflora 175  
Medtr1g008675.1 A0A072VD64 PAC:31099193 Medicago truncatula 186  
evm_27.model.AmTr_v1.0_scaffold00012.32 W1PJ44 PAC:31553185 Amborella trichopoda 102  
Prupe.1G449100.1.p A0A251RCR2 PAC:32115437 Prunus persica 568  
Aqcoe6G167600.1.p PAC:33064067 Aquilegia coerulea 517  
Aqcoe6G167600.2.p PAC:33064068 Aquilegia coerulea 454  
Aqcoe5G157700.1.p PAC:33087763 Aquilegia coerulea 155  
LOC_Os04g03010.1 PAC:33112897 Oryza sativa 79  
Dusal.0024s00052.1.p PAC:33202188 Dunaliella salina 1279  
AL3G44720.t1 PAC:35940810 Arabidopsis lyrata 211  
AL4G20200.t1 PAC:35921962 Arabidopsis lyrata 323  
AL6G42170.t1 PAC:35926653 Arabidopsis lyrata 187  
AUR62017519-RA PAC:36291570 Chenopodium quinoa 541  
Zm00008a032039_P01 PAC:37191563 Zea mays PH207 289  
Potri.010G242400.1.p A0A2K1YZI3 PAC:37221331 Populus trichocarpa 81  
Potri.010G231200.2.p B9HUW1 PAC:37219837 Populus trichocarpa 184  
Potri.010G231200.1.p B9HUW1 PAC:37219838 Populus trichocarpa 184  
Potri.010G231200.3.p A0A3N7FPB8 PAC:37219839 Populus trichocarpa 132  
Bol038477 PAC:37366801 Brassica oleracea capitata 59  
PGSC0003DMP400008361 PAC:37447107 Solanum tuberosum 284  
PGSC0003DMP400008362 PAC:37447108 Solanum tuberosum 284  
PGSC0003DMP400040887 PAC:37472788 Solanum tuberosum 150  
Anaoc.0011s1343.1.p PAC:37503707 Anacardium occidentale 106  
Anaoc.0005s1080.1.p PAC:37524287 Anacardium occidentale 266  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11782420
            10553913