Protein Domain : IPR008982

Type:  Domain Name:  Adenovirus pIV-related, attachment domain
Description:  The viral attachment protein domain forms part of the fibre proteins in adenoviruses [], and the sigma 1 protein in reoviruses []. Both proteins are trimers that contain fibrous tails and globular heads (reovirus), or knobs (adenovirus), which are structurally very similar. Both domain cores consist of eight anti-parallel beta-sheets, forming either a beta sandwich (fibre knob), or a beta-barrel (sigma 1 head), with a long loop containing an alpha helix. The remaining loops tend to be longer in the fibre knob. Functionally both the fibre knob and the sigma 1 head are involved in binding selectively to cell surface receptors. The reoviruses bind JAM (junction adhesion molecule), while the adenoviruses use the CAR (Coxsackievirus and adenovirus) receptor, with the exception of subgroup B adenoviruses []. Short Name:  Adenovirus_pIV-rel_att

2 Child Features

DB identifier Type Name
IPR000978 Domain Adenoviral fibre protein, knob
IPR027314 Domain Viral attachment sigma 1 globular domain

0 Contains

1 Cross References

Identifier
SSF49835

2 Found Ins

DB identifier Type Name
IPR002592 Family Viral attachment sigma 1, reoviral
IPR000931 Family Adenovirus fibre protein

3 GO Annotations

GO Term Gene Name
GO:0007155 IPR008982
GO:0019058 IPR008982
GO:0019062 IPR008982

3 Ontology Annotations

GO Term Gene Name
GO:0007155 IPR008982
GO:0019058 IPR008982
GO:0019062 IPR008982

0 Parent Features

20 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
Lus10031230 PAC:23151169 Linum usitatissimum 827  
Medtr8g040935.1 A0A072U014 PAC:31071519 Medicago truncatula 208  
PGSC0003DMP400036719 PAC:37428877 Solanum tuberosum 363  
PGSC0003DMP400001934 PAC:37463401 Solanum tuberosum 156  
HORVU6Hr1G079740.3 PAC:38514989 Hordeum vulgare 85  
HORVU7Hr1G065050.2 PAC:38538646 Hordeum vulgare 85  
Vigun10g017200.1.p PAC:39035540 Vigna unguiculata 188  
Vigun06g136100.1.p PAC:39047348 Vigna unguiculata 541  
Ca_08035 PAC:40149444 Cicer arietinum 434  
MgNONTOL.B0956.1.p PAC:41006080 Mimulus guttatus NONTOL 209  
Vigun06g136100.1.p PAC:43079308 Vigna unguiculata 541  
VuSuvita2.06G132800.1.p PAC:43126287 Vigna unguiculata Suvita2 541  
VuUCR779.06G133400.1.p PAC:43243834 Vigna unguiculata UCR779 541  
VuSanzi.06G132300.1.p PAC:43272864 Vigna unguiculata Sanzi 541  
VuCB5-2.06G134500.1.p PAC:43295528 Vigna unguiculata CB5-2 541  
MgNONTOL.B0956.1.p PAC:43614249 Mimulus guttatus NONTOL 209  
VuTZ30.06G126000.1.p PAC:44172971 Vigna unguiculata TZ30 541  
VuZN016.06G126300.1.p PAC:44105282 Vigna unguiculata ZN016 541  
Pl11G0000011900.1.v1 PAC:44400530 Phaseolus lunatus 229  
Spov3_chr1.01366 PAC:45125271 Spinacia oleracea 298  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11782420
            11437664
            10567268