Gene : Brdisv1BdTR11G1045404m.g B. distachyon BdTR11g v1
Defline:  (1 of 1) PTHR11451:SF3 - PROLINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  833
Name:  ? Brdisv1BdTR11G1045404m.g Secondary Identifier:  ? PAC:34643233
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BdistachyonBdTR11g TRNA-CHARGING-PWY Brachypodium distachyon BdTR11g pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brdisv1BdTR11G1045404m.g 0.5kb upstream 0.5kb upstream 2216 true pseudomolecule_7: 18277427-18279642 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 0.5kb upstream 0.5kb upstream 500 false pseudomolecule_7: 18279143-18279642 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 0.5kb downstream 0.5kb downstream 2216 true pseudomolecule_7: 18276927-18279142 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 0.5kb downstream 0.5kb downstream 500 false pseudomolecule_7: 18276927-18277426 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 1.0kb upstream 1.0kb upstream 2716 true pseudomolecule_7: 18277427-18280142 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 1.0kb upstream 1.0kb upstream 1000 false pseudomolecule_7: 18279143-18280142 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 1.0kb downstream 1.0kb downstream 2716 true pseudomolecule_7: 18276427-18279142 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 1.0kb downstream 1.0kb downstream 1000 false pseudomolecule_7: 18276427-18277426 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 2.0kb upstream 2.0kb upstream 3716 true pseudomolecule_7: 18277427-18281142 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 2.0kb upstream 2.0kb upstream 2000 false pseudomolecule_7: 18279143-18281142 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 2.0kb downstream 2.0kb downstream 3716 true pseudomolecule_7: 18275427-18279142 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 2.0kb downstream 2.0kb downstream 2000 false pseudomolecule_7: 18275427-18277426 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 5.0kb upstream 5.0kb upstream 6716 true pseudomolecule_7: 18277427-18284142 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 5.0kb upstream 5.0kb upstream 5000 false pseudomolecule_7: 18279143-18284142 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 5.0kb downstream 5.0kb downstream 6716 true pseudomolecule_7: 18272427-18279142 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 5.0kb downstream 5.0kb downstream 5000 false pseudomolecule_7: 18272427-18277426 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 10.0kb upstream 10.0kb upstream 11716 true pseudomolecule_7: 18277427-18289142 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 10.0kb upstream 10.0kb upstream 10000 false pseudomolecule_7: 18279143-18289142 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 10.0kb downstream 10.0kb downstream 11716 true pseudomolecule_7: 18267427-18279142 Brachypodium distachyon BdTR11g
Brdisv1BdTR11G1045404m.g 10.0kb downstream 10.0kb downstream 10000 false pseudomolecule_7: 18267427-18277426 Brachypodium distachyon BdTR11g

1 Protein Family

Cluster ID Method ID Method Name Sequence Alignment
66132619 5043 BrachyPan Singleton cluster - no MSA

0 Rna Seq Expressions

1 Strain

DB identifier