Gene : Potri.014G135500 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR21089//PTHR21089:SF7 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  1355
Name:  ? Potri.014G135500 Secondary Identifier:  ? PAC:27033773
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa ARO-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-6163 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.014G135500 0.5kb upstream 0.5kb upstream 5766 true Chr14: 10318455-10324220 Populus trichocarpa
Potri.014G135500 0.5kb upstream 0.5kb upstream 500 false Chr14: 10318455-10318954 Populus trichocarpa
Potri.014G135500 0.5kb downstream 0.5kb downstream 5766 true Chr14: 10318955-10324720 Populus trichocarpa
Potri.014G135500 0.5kb downstream 0.5kb downstream 500 false Chr14: 10324221-10324720 Populus trichocarpa
Potri.014G135500 1.0kb upstream 1.0kb upstream 6266 true Chr14: 10317955-10324220 Populus trichocarpa
Potri.014G135500 1.0kb upstream 1.0kb upstream 1000 false Chr14: 10317955-10318954 Populus trichocarpa
Potri.014G135500 1.0kb downstream 1.0kb downstream 6266 true Chr14: 10318955-10325220 Populus trichocarpa
Potri.014G135500 1.0kb downstream 1.0kb downstream 1000 false Chr14: 10324221-10325220 Populus trichocarpa
Potri.014G135500 2.0kb upstream 2.0kb upstream 7266 true Chr14: 10316955-10324220 Populus trichocarpa
Potri.014G135500 2.0kb upstream 2.0kb upstream 2000 false Chr14: 10316955-10318954 Populus trichocarpa
Potri.014G135500 2.0kb downstream 2.0kb downstream 7266 true Chr14: 10318955-10326220 Populus trichocarpa
Potri.014G135500 2.0kb downstream 2.0kb downstream 2000 false Chr14: 10324221-10326220 Populus trichocarpa
Potri.014G135500 5.0kb upstream 5.0kb upstream 10266 true Chr14: 10313955-10324220 Populus trichocarpa
Potri.014G135500 5.0kb upstream 5.0kb upstream 5000 false Chr14: 10313955-10318954 Populus trichocarpa
Potri.014G135500 5.0kb downstream 5.0kb downstream 10266 true Chr14: 10318955-10329220 Populus trichocarpa
Potri.014G135500 5.0kb downstream 5.0kb downstream 5000 false Chr14: 10324221-10329220 Populus trichocarpa
Potri.014G135500 10.0kb upstream 10.0kb upstream 15266 true Chr14: 10308955-10324220 Populus trichocarpa
Potri.014G135500 10.0kb upstream 10.0kb upstream 10000 false Chr14: 10308955-10318954 Populus trichocarpa
Potri.014G135500 10.0kb downstream 10.0kb downstream 15266 true Chr14: 10318955-10334220 Populus trichocarpa
Potri.014G135500 10.0kb downstream 10.0kb downstream 10000 false Chr14: 10324221-10334220 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.121     Low  
cufflinks 2.14       High
cufflinks 0.53        
cufflinks 0.691        
cufflinks 0.122     Low  
cufflinks 0.642        
cufflinks 0.169        
cufflinks 0.288        
cufflinks 0.1     Low  
cufflinks 0.164     Low  
cufflinks 0.011     Low Low
cufflinks 0.67        
cufflinks 0.534        
cufflinks 0.093     Low  
cufflinks 0.267        
cufflinks 0.819        
cufflinks 0.083     Low Low
cufflinks 0.188        
cufflinks 0.828        
cufflinks 1.466       High
cufflinks 0.896        
cufflinks 0.139     Low  
cufflinks 1.301       High
cufflinks 0.077     Low Low
cufflinks 0.101     Low  
cufflinks 0.055     Low  
cufflinks 0.017     Low  
cufflinks 0.055     Low  
cufflinks 0.542       High
cufflinks 0.023     Low  

0 Strain