Gene : Potri.011G125800 P. trichocarpa v3.0
Defline:  (1 of 2) K11836 - ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12] (USP5_13, UBP14) Genomic Order:  1258
Name:  ? Potri.011G125800 Secondary Identifier:  ? PAC:27001337
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Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.011G125800 0.5kb upstream 0.5kb upstream 11354 true Chr11: 15091909-15103262 Populus trichocarpa
Potri.011G125800 0.5kb upstream 0.5kb upstream 500 false Chr11: 15091909-15092408 Populus trichocarpa
Potri.011G125800 0.5kb downstream 0.5kb downstream 11354 true Chr11: 15092409-15103762 Populus trichocarpa
Potri.011G125800 0.5kb downstream 0.5kb downstream 500 false Chr11: 15103263-15103762 Populus trichocarpa
Potri.011G125800 1.0kb upstream 1.0kb upstream 11854 true Chr11: 15091409-15103262 Populus trichocarpa
Potri.011G125800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15091409-15092408 Populus trichocarpa
Potri.011G125800 1.0kb downstream 1.0kb downstream 11854 true Chr11: 15092409-15104262 Populus trichocarpa
Potri.011G125800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15103263-15104262 Populus trichocarpa
Potri.011G125800 2.0kb upstream 2.0kb upstream 12854 true Chr11: 15090409-15103262 Populus trichocarpa
Potri.011G125800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15090409-15092408 Populus trichocarpa
Potri.011G125800 2.0kb downstream 2.0kb downstream 12854 true Chr11: 15092409-15105262 Populus trichocarpa
Potri.011G125800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15103263-15105262 Populus trichocarpa
Potri.011G125800 5.0kb upstream 5.0kb upstream 15854 true Chr11: 15087409-15103262 Populus trichocarpa
Potri.011G125800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15087409-15092408 Populus trichocarpa
Potri.011G125800 5.0kb downstream 5.0kb downstream 15854 true Chr11: 15092409-15108262 Populus trichocarpa
Potri.011G125800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15103263-15108262 Populus trichocarpa
Potri.011G125800 10.0kb upstream 10.0kb upstream 20854 true Chr11: 15082409-15103262 Populus trichocarpa
Potri.011G125800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15082409-15092408 Populus trichocarpa
Potri.011G125800 10.0kb downstream 10.0kb downstream 20854 true Chr11: 15092409-15113262 Populus trichocarpa
Potri.011G125800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15103263-15113262 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.587        
cufflinks 1.108       Low
cufflinks 0.945       Low
cufflinks 1.032       Low
cufflinks 1.79        
cufflinks 2.096        
cufflinks 1.418        
cufflinks 1.923        
cufflinks 2.192        
cufflinks 1.757        
cufflinks 2.118        
cufflinks 2.379       High
cufflinks 2.547       High
cufflinks 1.581        
cufflinks 2.01        
cufflinks 2.499       High
cufflinks 2.106        
cufflinks 1.713        
cufflinks 2.081        
cufflinks 0.905       Low
cufflinks 1.906        
cufflinks 1.088       Low
cufflinks 1.873        
cufflinks 2.231        
cufflinks 21.02        
cufflinks 25.035        
cufflinks 28.729     High  
cufflinks 30.162     High  
cufflinks 34.833     High High
cufflinks 25.496        

0 Strain