Gene : Potri.001G051700 P. trichocarpa v3.0
Defline:  (1 of 2) K01687 - dihydroxy-acid dehydratase (ilvD) Genomic Order:  517
Name:  ? Potri.001G051700 Secondary Identifier:  ? PAC:27047569
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa BRANCHED-CHAIN-AA-SYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa VALSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa ILEUSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G051700 0.5kb upstream 0.5kb upstream 6068 true Chr01: 3921938-3928005 Populus trichocarpa
Potri.001G051700 0.5kb upstream 0.5kb upstream 500 false Chr01: 3927506-3928005 Populus trichocarpa
Potri.001G051700 0.5kb downstream 0.5kb downstream 6068 true Chr01: 3921438-3927505 Populus trichocarpa
Potri.001G051700 0.5kb downstream 0.5kb downstream 500 false Chr01: 3921438-3921937 Populus trichocarpa
Potri.001G051700 1.0kb upstream 1.0kb upstream 6568 true Chr01: 3921938-3928505 Populus trichocarpa
Potri.001G051700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3927506-3928505 Populus trichocarpa
Potri.001G051700 1.0kb downstream 1.0kb downstream 6568 true Chr01: 3920938-3927505 Populus trichocarpa
Potri.001G051700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3920938-3921937 Populus trichocarpa
Potri.001G051700 2.0kb upstream 2.0kb upstream 7568 true Chr01: 3921938-3929505 Populus trichocarpa
Potri.001G051700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3927506-3929505 Populus trichocarpa
Potri.001G051700 2.0kb downstream 2.0kb downstream 7568 true Chr01: 3919938-3927505 Populus trichocarpa
Potri.001G051700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3919938-3921937 Populus trichocarpa
Potri.001G051700 5.0kb upstream 5.0kb upstream 10568 true Chr01: 3921938-3932505 Populus trichocarpa
Potri.001G051700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3927506-3932505 Populus trichocarpa
Potri.001G051700 5.0kb downstream 5.0kb downstream 10568 true Chr01: 3916938-3927505 Populus trichocarpa
Potri.001G051700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3916938-3921937 Populus trichocarpa
Potri.001G051700 10.0kb upstream 10.0kb upstream 15568 true Chr01: 3921938-3937505 Populus trichocarpa
Potri.001G051700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3927506-3937505 Populus trichocarpa
Potri.001G051700 10.0kb downstream 10.0kb downstream 15568 true Chr01: 3911938-3927505 Populus trichocarpa
Potri.001G051700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3911938-3921937 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.007       Low
cufflinks 7.462        
cufflinks 5.54       Low
cufflinks 4.352       Low
cufflinks 6.54        
cufflinks 7.557        
cufflinks 10.71     High  
cufflinks 10.378     High  
cufflinks 11.418     High  
cufflinks 15.248     High High
cufflinks 7.89        
cufflinks 12.386     High  
cufflinks 7.13        
cufflinks 7.862        
cufflinks 5.395       Low
cufflinks 5.514       Low
cufflinks 17.361     High High
cufflinks 13.293     High High
cufflinks 16.747     High High
cufflinks 11.396     High  
cufflinks 6.565        
cufflinks 9.966     High  
cufflinks 10.023     High  
cufflinks 10.338     High  
cufflinks 1.21        
cufflinks 1.325        
cufflinks 1.617        
cufflinks 2.949        
cufflinks 8.89       High
cufflinks 0.861        

0 Strain