Gene : Potri.001G207000 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR13370//PTHR13370:SF3 - RNA METHYLASE-RELATED // TRNA (GUANINE(10)-N2)-METHYLTRANSFERASE HOMOLOG Genomic Order:  2070
Name:  ? Potri.001G207000 Secondary Identifier:  ? PAC:27043706
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6829 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G207000 0.5kb upstream 0.5kb upstream 4604 true Chr01: 20738769-20743372 Populus trichocarpa
Potri.001G207000 0.5kb upstream 0.5kb upstream 500 false Chr01: 20742873-20743372 Populus trichocarpa
Potri.001G207000 0.5kb downstream 0.5kb downstream 4604 true Chr01: 20738269-20742872 Populus trichocarpa
Potri.001G207000 0.5kb downstream 0.5kb downstream 500 false Chr01: 20738269-20738768 Populus trichocarpa
Potri.001G207000 1.0kb upstream 1.0kb upstream 5104 true Chr01: 20738769-20743872 Populus trichocarpa
Potri.001G207000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 20742873-20743872 Populus trichocarpa
Potri.001G207000 1.0kb downstream 1.0kb downstream 5104 true Chr01: 20737769-20742872 Populus trichocarpa
Potri.001G207000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 20737769-20738768 Populus trichocarpa
Potri.001G207000 2.0kb upstream 2.0kb upstream 6104 true Chr01: 20738769-20744872 Populus trichocarpa
Potri.001G207000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 20742873-20744872 Populus trichocarpa
Potri.001G207000 2.0kb downstream 2.0kb downstream 6104 true Chr01: 20736769-20742872 Populus trichocarpa
Potri.001G207000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 20736769-20738768 Populus trichocarpa
Potri.001G207000 5.0kb upstream 5.0kb upstream 9104 true Chr01: 20738769-20747872 Populus trichocarpa
Potri.001G207000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 20742873-20747872 Populus trichocarpa
Potri.001G207000 5.0kb downstream 5.0kb downstream 9104 true Chr01: 20733769-20742872 Populus trichocarpa
Potri.001G207000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 20733769-20738768 Populus trichocarpa
Potri.001G207000 10.0kb upstream 10.0kb upstream 14104 true Chr01: 20738769-20752872 Populus trichocarpa
Potri.001G207000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 20742873-20752872 Populus trichocarpa
Potri.001G207000 10.0kb downstream 10.0kb downstream 14104 true Chr01: 20728769-20742872 Populus trichocarpa
Potri.001G207000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 20728769-20738768 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.766        
cufflinks 5.878        
cufflinks 6.487        
cufflinks 26.868     High High
cufflinks 9.234        
cufflinks 21.393     High High
cufflinks 13.678     High  
cufflinks 1.537       Low
cufflinks 13.312     High  
cufflinks 5.124        
cufflinks 6.392        
cufflinks 7.34        
cufflinks 7.496        
cufflinks 5.717        
cufflinks 2.261       Low
cufflinks 4.458        
cufflinks 3.86        
cufflinks 17.497     High High
cufflinks 22.955     High High
cufflinks 6.934        
cufflinks 3.504       Low
cufflinks 23.136     High High
cufflinks 10.169        
cufflinks 9.635        
cufflinks 31.363     High  
cufflinks 49.412     High  
cufflinks 40.364     High  
cufflinks 67.764     High High
cufflinks 38.375     High  
cufflinks 45.592     High  

0 Strain