Gene : Potri.001G086800 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR21320//PTHR21320:SF0 - CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED // METHYLTRANSFERASE-LIKE PROTEIN 17, MITOCHONDRIAL Genomic Order:  868
Name:  ? Potri.001G086800 Secondary Identifier:  ? PAC:27041978
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G086800 0.5kb upstream 0.5kb upstream 7480 true Chr01: 6864641-6872120 Populus trichocarpa
Potri.001G086800 0.5kb upstream 0.5kb upstream 500 false Chr01: 6871621-6872120 Populus trichocarpa
Potri.001G086800 0.5kb downstream 0.5kb downstream 7480 true Chr01: 6864141-6871620 Populus trichocarpa
Potri.001G086800 0.5kb downstream 0.5kb downstream 500 false Chr01: 6864141-6864640 Populus trichocarpa
Potri.001G086800 1.0kb upstream 1.0kb upstream 7980 true Chr01: 6864641-6872620 Populus trichocarpa
Potri.001G086800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 6871621-6872620 Populus trichocarpa
Potri.001G086800 1.0kb downstream 1.0kb downstream 7980 true Chr01: 6863641-6871620 Populus trichocarpa
Potri.001G086800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 6863641-6864640 Populus trichocarpa
Potri.001G086800 2.0kb upstream 2.0kb upstream 8980 true Chr01: 6864641-6873620 Populus trichocarpa
Potri.001G086800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 6871621-6873620 Populus trichocarpa
Potri.001G086800 2.0kb downstream 2.0kb downstream 8980 true Chr01: 6862641-6871620 Populus trichocarpa
Potri.001G086800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 6862641-6864640 Populus trichocarpa
Potri.001G086800 5.0kb upstream 5.0kb upstream 11980 true Chr01: 6864641-6876620 Populus trichocarpa
Potri.001G086800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 6871621-6876620 Populus trichocarpa
Potri.001G086800 5.0kb downstream 5.0kb downstream 11980 true Chr01: 6859641-6871620 Populus trichocarpa
Potri.001G086800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 6859641-6864640 Populus trichocarpa
Potri.001G086800 10.0kb upstream 10.0kb upstream 16980 true Chr01: 6864641-6881620 Populus trichocarpa
Potri.001G086800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 6871621-6881620 Populus trichocarpa
Potri.001G086800 10.0kb downstream 10.0kb downstream 16980 true Chr01: 6854641-6871620 Populus trichocarpa
Potri.001G086800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 6854641-6864640 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.35       Low
cufflinks 0.479        
cufflinks 0.666        
cufflinks 0.513        
cufflinks 0.704        
cufflinks 0.422        
cufflinks 0.721        
cufflinks 0.649        
cufflinks 0.625        
cufflinks 0.561        
cufflinks 0.539        
cufflinks 0.493        
cufflinks 1.353       High
cufflinks 0.387       Low
cufflinks 0.738        
cufflinks 0.633        
cufflinks 0.243       Low
cufflinks 0.578        
cufflinks 0.775        
cufflinks 0.478        
cufflinks 0.939       High
cufflinks 0.656        
cufflinks 0.765        
cufflinks 0.651        
cufflinks 7.567        
cufflinks 7.96        
cufflinks 7.447        
cufflinks 12.332       High
cufflinks 12.018       High
cufflinks 8.994        

0 Strain