Gene : Potri.001G026300 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR19278//PTHR19278:SF39//PTHR19278:SF9 - FAMILY NOT NAMED // SUBFAMILY NOT NAMED // URIDINE 5'-MONOPHOSPHATE SYNTHASE Genomic Order:  263
Name:  ? Potri.001G026300 Secondary Identifier:  ? PAC:27048258
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5686 Populus trichocarpa pathologic  
Ptrichocarpa PWY0-162 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7211 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G026300 0.5kb upstream 0.5kb upstream 3464 true Chr01: 1931948-1935411 Populus trichocarpa
Potri.001G026300 0.5kb upstream 0.5kb upstream 500 false Chr01: 1934912-1935411 Populus trichocarpa
Potri.001G026300 0.5kb downstream 0.5kb downstream 3464 true Chr01: 1931448-1934911 Populus trichocarpa
Potri.001G026300 0.5kb downstream 0.5kb downstream 500 false Chr01: 1931448-1931947 Populus trichocarpa
Potri.001G026300 1.0kb upstream 1.0kb upstream 3964 true Chr01: 1931948-1935911 Populus trichocarpa
Potri.001G026300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1934912-1935911 Populus trichocarpa
Potri.001G026300 1.0kb downstream 1.0kb downstream 3964 true Chr01: 1930948-1934911 Populus trichocarpa
Potri.001G026300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1930948-1931947 Populus trichocarpa
Potri.001G026300 2.0kb upstream 2.0kb upstream 4964 true Chr01: 1931948-1936911 Populus trichocarpa
Potri.001G026300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1934912-1936911 Populus trichocarpa
Potri.001G026300 2.0kb downstream 2.0kb downstream 4964 true Chr01: 1929948-1934911 Populus trichocarpa
Potri.001G026300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1929948-1931947 Populus trichocarpa
Potri.001G026300 5.0kb upstream 5.0kb upstream 7964 true Chr01: 1931948-1939911 Populus trichocarpa
Potri.001G026300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1934912-1939911 Populus trichocarpa
Potri.001G026300 5.0kb downstream 5.0kb downstream 7964 true Chr01: 1926948-1934911 Populus trichocarpa
Potri.001G026300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1926948-1931947 Populus trichocarpa
Potri.001G026300 10.0kb upstream 10.0kb upstream 12964 true Chr01: 1931948-1944911 Populus trichocarpa
Potri.001G026300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1934912-1944911 Populus trichocarpa
Potri.001G026300 10.0kb downstream 10.0kb downstream 12964 true Chr01: 1921948-1934911 Populus trichocarpa
Potri.001G026300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1921948-1931947 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.577       Low
cufflinks 3.388        
cufflinks 8.165       High
cufflinks 3.036        
cufflinks 3.617        
cufflinks 2.905       Low
cufflinks 5.854        
cufflinks 6.012        
cufflinks 3.781        
cufflinks 5.606        
cufflinks 6.873       High
cufflinks 4.504        
cufflinks 3.529        
cufflinks 5.723        
cufflinks 6.154        
cufflinks 5.419        
cufflinks 1.278       Low
cufflinks 3.73        
cufflinks 3.376        
cufflinks 4.575        
cufflinks 6.841       High
cufflinks 6.745       High
cufflinks 4.257        
cufflinks 6.592        
cufflinks 18.285        
cufflinks 18.536        
cufflinks 18.955        
cufflinks 20.94        
cufflinks 23.507        
cufflinks 17.83        

0 Strain