Gene : Potri.001G348600 P. trichocarpa v3.0
Defline:  (1 of 1) 1.4.3.16 - L-aspartate oxidase / LASPO Genomic Order:  3486
Name:  ? Potri.001G348600 Secondary Identifier:  ? PAC:27046479
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PYRIDNUCSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G348600 0.5kb upstream 0.5kb upstream 6390 true Chr01: 35446609-35452998 Populus trichocarpa
Potri.001G348600 0.5kb upstream 0.5kb upstream 500 false Chr01: 35452499-35452998 Populus trichocarpa
Potri.001G348600 0.5kb downstream 0.5kb downstream 6390 true Chr01: 35446109-35452498 Populus trichocarpa
Potri.001G348600 0.5kb downstream 0.5kb downstream 500 false Chr01: 35446109-35446608 Populus trichocarpa
Potri.001G348600 1.0kb upstream 1.0kb upstream 6890 true Chr01: 35446609-35453498 Populus trichocarpa
Potri.001G348600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35452499-35453498 Populus trichocarpa
Potri.001G348600 1.0kb downstream 1.0kb downstream 6890 true Chr01: 35445609-35452498 Populus trichocarpa
Potri.001G348600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35445609-35446608 Populus trichocarpa
Potri.001G348600 2.0kb upstream 2.0kb upstream 7890 true Chr01: 35446609-35454498 Populus trichocarpa
Potri.001G348600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35452499-35454498 Populus trichocarpa
Potri.001G348600 2.0kb downstream 2.0kb downstream 7890 true Chr01: 35444609-35452498 Populus trichocarpa
Potri.001G348600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35444609-35446608 Populus trichocarpa
Potri.001G348600 5.0kb upstream 5.0kb upstream 10890 true Chr01: 35446609-35457498 Populus trichocarpa
Potri.001G348600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35452499-35457498 Populus trichocarpa
Potri.001G348600 5.0kb downstream 5.0kb downstream 10890 true Chr01: 35441609-35452498 Populus trichocarpa
Potri.001G348600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35441609-35446608 Populus trichocarpa
Potri.001G348600 10.0kb upstream 10.0kb upstream 15890 true Chr01: 35446609-35462498 Populus trichocarpa
Potri.001G348600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35452499-35462498 Populus trichocarpa
Potri.001G348600 10.0kb downstream 10.0kb downstream 15890 true Chr01: 35436609-35452498 Populus trichocarpa
Potri.001G348600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35436609-35446608 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.476        
cufflinks 0.599        
cufflinks 0.786       High
cufflinks 0.747       High
cufflinks 0.492        
cufflinks 0.352       Low
cufflinks 0.447        
cufflinks 0.595        
cufflinks 0.404        
cufflinks 0.38        
cufflinks 0.488        
cufflinks 0.472        
cufflinks 0.248       Low
cufflinks 0.402        
cufflinks 0.52        
cufflinks 0.495        
cufflinks 1.017       High
cufflinks 0.515        
cufflinks 0.332       Low
cufflinks 0.922       High
cufflinks 0.367        
cufflinks 0.438        
cufflinks 0.472        
cufflinks 0.395        
cufflinks 10.676       High
cufflinks 4.491       Low
cufflinks 3.66       Low
cufflinks 6.73        
cufflinks 6.931        
cufflinks 9.581        

0 Strain