Gene : Potri.001G383900 P. trichocarpa v3.0
Defline:  (1 of 3) K10639 - E3 ubiquitin-protein ligase CCNP1IP1 [EC:6.3.2.19] (CCNB1IP1, HEI10) Genomic Order:  3839
Name:  ? Potri.001G383900 Secondary Identifier:  ? PAC:27048447
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G383900 0.5kb upstream 0.5kb upstream 3839 true Chr01: 39965241-39969079 Populus trichocarpa
Potri.001G383900 0.5kb upstream 0.5kb upstream 500 false Chr01: 39968580-39969079 Populus trichocarpa
Potri.001G383900 0.5kb downstream 0.5kb downstream 3839 true Chr01: 39964741-39968579 Populus trichocarpa
Potri.001G383900 0.5kb downstream 0.5kb downstream 500 false Chr01: 39964741-39965240 Populus trichocarpa
Potri.001G383900 1.0kb upstream 1.0kb upstream 4339 true Chr01: 39965241-39969579 Populus trichocarpa
Potri.001G383900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 39968580-39969579 Populus trichocarpa
Potri.001G383900 1.0kb downstream 1.0kb downstream 4339 true Chr01: 39964241-39968579 Populus trichocarpa
Potri.001G383900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 39964241-39965240 Populus trichocarpa
Potri.001G383900 2.0kb upstream 2.0kb upstream 5339 true Chr01: 39965241-39970579 Populus trichocarpa
Potri.001G383900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 39968580-39970579 Populus trichocarpa
Potri.001G383900 2.0kb downstream 2.0kb downstream 5339 true Chr01: 39963241-39968579 Populus trichocarpa
Potri.001G383900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 39963241-39965240 Populus trichocarpa
Potri.001G383900 5.0kb upstream 5.0kb upstream 8339 true Chr01: 39965241-39973579 Populus trichocarpa
Potri.001G383900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 39968580-39973579 Populus trichocarpa
Potri.001G383900 5.0kb downstream 5.0kb downstream 8339 true Chr01: 39960241-39968579 Populus trichocarpa
Potri.001G383900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 39960241-39965240 Populus trichocarpa
Potri.001G383900 10.0kb upstream 10.0kb upstream 13339 true Chr01: 39965241-39978579 Populus trichocarpa
Potri.001G383900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 39968580-39978579 Populus trichocarpa
Potri.001G383900 10.0kb downstream 10.0kb downstream 13339 true Chr01: 39955241-39968579 Populus trichocarpa
Potri.001G383900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 39955241-39965240 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.028     Low  
cufflinks 0.046     Low  
cufflinks 0.05     Low  
cufflinks 0.045     Low  
cufflinks 0.128     Low High
cufflinks 0.134     Low High
cufflinks 0.019     Low  
cufflinks 0.034     Low  
cufflinks 0.015     Low Low
cufflinks 0.039     Low  
cufflinks 0.073     Low  
cufflinks 0.22       High
cufflinks 0.021     Low  
cufflinks 0.039     Low  
cufflinks 0.022     Low  
cufflinks 0.029     Low  
cufflinks 0.046     Low  
cufflinks 0.098     Low High
cufflinks 0.006     Low Low
cufflinks 0.019     Low  
cufflinks 0.025     Low  
cufflinks 0.073     Low  
cufflinks 0.096     Low High
cufflinks 0.015     Low Low
cufflinks 7.152       High
cufflinks 2.587        
cufflinks 1.774       Low
cufflinks 4.268        
cufflinks 2.883        
cufflinks 5.677        

0 Strain