Gene : Potri.001G300900 P. trichocarpa v3.0
Defline:  (1 of 7) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Genomic Order:  3009
Name:  ? Potri.001G300900 Secondary Identifier:  ? PAC:27048505
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa SER-GLYSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa SERSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G300900 0.5kb upstream 0.5kb upstream 3750 true Chr01: 30488904-30492653 Populus trichocarpa
Potri.001G300900 0.5kb upstream 0.5kb upstream 500 false Chr01: 30488904-30489403 Populus trichocarpa
Potri.001G300900 0.5kb downstream 0.5kb downstream 3750 true Chr01: 30489404-30493153 Populus trichocarpa
Potri.001G300900 0.5kb downstream 0.5kb downstream 500 false Chr01: 30492654-30493153 Populus trichocarpa
Potri.001G300900 1.0kb upstream 1.0kb upstream 4250 true Chr01: 30488404-30492653 Populus trichocarpa
Potri.001G300900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 30488404-30489403 Populus trichocarpa
Potri.001G300900 1.0kb downstream 1.0kb downstream 4250 true Chr01: 30489404-30493653 Populus trichocarpa
Potri.001G300900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 30492654-30493653 Populus trichocarpa
Potri.001G300900 2.0kb upstream 2.0kb upstream 5250 true Chr01: 30487404-30492653 Populus trichocarpa
Potri.001G300900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 30487404-30489403 Populus trichocarpa
Potri.001G300900 2.0kb downstream 2.0kb downstream 5250 true Chr01: 30489404-30494653 Populus trichocarpa
Potri.001G300900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 30492654-30494653 Populus trichocarpa
Potri.001G300900 5.0kb upstream 5.0kb upstream 8250 true Chr01: 30484404-30492653 Populus trichocarpa
Potri.001G300900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 30484404-30489403 Populus trichocarpa
Potri.001G300900 5.0kb downstream 5.0kb downstream 8250 true Chr01: 30489404-30497653 Populus trichocarpa
Potri.001G300900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 30492654-30497653 Populus trichocarpa
Potri.001G300900 10.0kb upstream 10.0kb upstream 13250 true Chr01: 30479404-30492653 Populus trichocarpa
Potri.001G300900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 30479404-30489403 Populus trichocarpa
Potri.001G300900 10.0kb downstream 10.0kb downstream 13250 true Chr01: 30489404-30502653 Populus trichocarpa
Potri.001G300900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 30492654-30502653 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.041       Low
cufflinks 18.508     High  
cufflinks 11.299     High  
cufflinks 22.141     High  
cufflinks 10.595     High  
cufflinks 39.568     High High
cufflinks 25.395     High  
cufflinks 37.337     High High
cufflinks 5.919       Low
cufflinks 22.524     High  
cufflinks 8.649     High  
cufflinks 8.475        
cufflinks 11.398     High  
cufflinks 12.33     High  
cufflinks 10.238     High  
cufflinks 5.784       Low
cufflinks 36.319     High High
cufflinks 43.759     High High
cufflinks 9.231        
cufflinks 27.898     High  
cufflinks 21.324     High  
cufflinks 17.604     High  
cufflinks 11.72     High  
cufflinks 23.075     High  
cufflinks 8.286        
cufflinks 5.963       Low
cufflinks 6.317       Low
cufflinks 12.661        
cufflinks 20.613       High
cufflinks 10.178        

0 Strain