Gene : Potri.001G179500 P. trichocarpa v3.0
Defline:  (1 of 1) PTHR12952:SF0 - PROTEIN SYS1 HOMOLOG-RELATED Genomic Order:  1795
Name:  ? Potri.001G179500 Secondary Identifier:  ? PAC:27048333
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G179500 0.5kb upstream 0.5kb upstream 2749 true Chr01: 15524827-15527575 Populus trichocarpa
Potri.001G179500 0.5kb upstream 0.5kb upstream 500 false Chr01: 15527076-15527575 Populus trichocarpa
Potri.001G179500 0.5kb downstream 0.5kb downstream 2749 true Chr01: 15524327-15527075 Populus trichocarpa
Potri.001G179500 0.5kb downstream 0.5kb downstream 500 false Chr01: 15524327-15524826 Populus trichocarpa
Potri.001G179500 1.0kb upstream 1.0kb upstream 3249 true Chr01: 15524827-15528075 Populus trichocarpa
Potri.001G179500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 15527076-15528075 Populus trichocarpa
Potri.001G179500 1.0kb downstream 1.0kb downstream 3249 true Chr01: 15523827-15527075 Populus trichocarpa
Potri.001G179500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 15523827-15524826 Populus trichocarpa
Potri.001G179500 2.0kb upstream 2.0kb upstream 4249 true Chr01: 15524827-15529075 Populus trichocarpa
Potri.001G179500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 15527076-15529075 Populus trichocarpa
Potri.001G179500 2.0kb downstream 2.0kb downstream 4249 true Chr01: 15522827-15527075 Populus trichocarpa
Potri.001G179500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 15522827-15524826 Populus trichocarpa
Potri.001G179500 5.0kb upstream 5.0kb upstream 7249 true Chr01: 15524827-15532075 Populus trichocarpa
Potri.001G179500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 15527076-15532075 Populus trichocarpa
Potri.001G179500 5.0kb downstream 5.0kb downstream 7249 true Chr01: 15519827-15527075 Populus trichocarpa
Potri.001G179500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 15519827-15524826 Populus trichocarpa
Potri.001G179500 10.0kb upstream 10.0kb upstream 12249 true Chr01: 15524827-15537075 Populus trichocarpa
Potri.001G179500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 15527076-15537075 Populus trichocarpa
Potri.001G179500 10.0kb downstream 10.0kb downstream 12249 true Chr01: 15514827-15527075 Populus trichocarpa
Potri.001G179500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 15514827-15524826 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.626       Low
cufflinks 5.186        
cufflinks 5.31        
cufflinks 4.617       Low
cufflinks 4.557       Low
cufflinks 5.644        
cufflinks 5.048        
cufflinks 4.658        
cufflinks 6.036        
cufflinks 6.104        
cufflinks 8.252       High
cufflinks 5.283        
cufflinks 4.99        
cufflinks 4.719        
cufflinks 5.814        
cufflinks 8.89     High High
cufflinks 5.273        
cufflinks 4.661        
cufflinks 5.484        
cufflinks 5.823        
cufflinks 5.743        
cufflinks 5.604        
cufflinks 5.267        
cufflinks 6.376        
cufflinks 2.299        
cufflinks 2.036       Low
cufflinks 2.248        
cufflinks 3.133        
cufflinks 3.982       High
cufflinks 2.626        

0 Strain