Gene : Potri.001G418400 P. trichocarpa v3.0
Defline:  (1 of 1) KOG3330 - Transport protein particle (TRAPP) complex subunit Genomic Order:  4184
Name:  ? Potri.001G418400 Secondary Identifier:  ? PAC:27048353
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G418400 0.5kb upstream 0.5kb upstream 3424 true Chr01: 44318798-44322221 Populus trichocarpa
Potri.001G418400 0.5kb upstream 0.5kb upstream 500 false Chr01: 44321722-44322221 Populus trichocarpa
Potri.001G418400 0.5kb downstream 0.5kb downstream 3424 true Chr01: 44318298-44321721 Populus trichocarpa
Potri.001G418400 0.5kb downstream 0.5kb downstream 500 false Chr01: 44318298-44318797 Populus trichocarpa
Potri.001G418400 1.0kb upstream 1.0kb upstream 3924 true Chr01: 44318798-44322721 Populus trichocarpa
Potri.001G418400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44321722-44322721 Populus trichocarpa
Potri.001G418400 1.0kb downstream 1.0kb downstream 3924 true Chr01: 44317798-44321721 Populus trichocarpa
Potri.001G418400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44317798-44318797 Populus trichocarpa
Potri.001G418400 2.0kb upstream 2.0kb upstream 4924 true Chr01: 44318798-44323721 Populus trichocarpa
Potri.001G418400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44321722-44323721 Populus trichocarpa
Potri.001G418400 2.0kb downstream 2.0kb downstream 4924 true Chr01: 44316798-44321721 Populus trichocarpa
Potri.001G418400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44316798-44318797 Populus trichocarpa
Potri.001G418400 5.0kb upstream 5.0kb upstream 7924 true Chr01: 44318798-44326721 Populus trichocarpa
Potri.001G418400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44321722-44326721 Populus trichocarpa
Potri.001G418400 5.0kb downstream 5.0kb downstream 7924 true Chr01: 44313798-44321721 Populus trichocarpa
Potri.001G418400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44313798-44318797 Populus trichocarpa
Potri.001G418400 10.0kb upstream 10.0kb upstream 12924 true Chr01: 44318798-44331721 Populus trichocarpa
Potri.001G418400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44321722-44331721 Populus trichocarpa
Potri.001G418400 10.0kb downstream 10.0kb downstream 12924 true Chr01: 44308798-44321721 Populus trichocarpa
Potri.001G418400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44308798-44318797 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.432     High Low
cufflinks 23.346     High High
cufflinks 21.861     High  
cufflinks 16.151     High Low
cufflinks 25.791     High High
cufflinks 15.911     High Low
cufflinks 15.329     High Low
cufflinks 21.813     High  
cufflinks 19.739     High  
cufflinks 21.296     High  
cufflinks 21.802     High  
cufflinks 17.974     High  
cufflinks 21.064     High  
cufflinks 21.542     High  
cufflinks 15.865     High Low
cufflinks 21.205     High  
cufflinks 18.818     High  
cufflinks 19.303     High  
cufflinks 20.977     High  
cufflinks 19.951     High  
cufflinks 21.422     High  
cufflinks 15.695     High Low
cufflinks 22.353     High  
cufflinks 16.399     High Low
cufflinks 42.263     High  
cufflinks 31.281     High  
cufflinks 36.046     High  
cufflinks 43.508     High  
cufflinks 58.971     High High
cufflinks 31.145     High  

0 Strain