Gene : Potri.001G104500 P. trichocarpa v3.0
Defline:  (1 of 2) 6.3.2.2 - Glutamate--cysteine ligase / Gamma-glutamylcysteine synthetase Genomic Order:  1045
Name:  ? Potri.001G104500 Secondary Identifier:  ? PAC:27048175
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa GLUTATHIONESYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G104500 0.5kb upstream 0.5kb upstream 7883 true Chr01: 8339649-8347531 Populus trichocarpa
Potri.001G104500 0.5kb upstream 0.5kb upstream 500 false Chr01: 8339649-8340148 Populus trichocarpa
Potri.001G104500 0.5kb downstream 0.5kb downstream 7883 true Chr01: 8340149-8348031 Populus trichocarpa
Potri.001G104500 0.5kb downstream 0.5kb downstream 500 false Chr01: 8347532-8348031 Populus trichocarpa
Potri.001G104500 1.0kb upstream 1.0kb upstream 8383 true Chr01: 8339149-8347531 Populus trichocarpa
Potri.001G104500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 8339149-8340148 Populus trichocarpa
Potri.001G104500 1.0kb downstream 1.0kb downstream 8383 true Chr01: 8340149-8348531 Populus trichocarpa
Potri.001G104500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 8347532-8348531 Populus trichocarpa
Potri.001G104500 2.0kb upstream 2.0kb upstream 9383 true Chr01: 8338149-8347531 Populus trichocarpa
Potri.001G104500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 8338149-8340148 Populus trichocarpa
Potri.001G104500 2.0kb downstream 2.0kb downstream 9383 true Chr01: 8340149-8349531 Populus trichocarpa
Potri.001G104500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 8347532-8349531 Populus trichocarpa
Potri.001G104500 5.0kb upstream 5.0kb upstream 12383 true Chr01: 8335149-8347531 Populus trichocarpa
Potri.001G104500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 8335149-8340148 Populus trichocarpa
Potri.001G104500 5.0kb downstream 5.0kb downstream 12383 true Chr01: 8340149-8352531 Populus trichocarpa
Potri.001G104500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 8347532-8352531 Populus trichocarpa
Potri.001G104500 10.0kb upstream 10.0kb upstream 17383 true Chr01: 8330149-8347531 Populus trichocarpa
Potri.001G104500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 8330149-8340148 Populus trichocarpa
Potri.001G104500 10.0kb downstream 10.0kb downstream 17383 true Chr01: 8340149-8357531 Populus trichocarpa
Potri.001G104500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 8347532-8357531 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.314       High
cufflinks 0.855        
cufflinks 3.102       High
cufflinks 1.103        
cufflinks 2.516       High
cufflinks 0.541       Low
cufflinks 1.133        
cufflinks 1.065        
cufflinks 0.954        
cufflinks 0.605       Low
cufflinks 0.788        
cufflinks 0.604       Low
cufflinks 1.708        
cufflinks 0.807        
cufflinks 1.994       High
cufflinks 1.25        
cufflinks 2.509       High
cufflinks 0.915        
cufflinks 0.721        
cufflinks 1.939       High
cufflinks 0.99        
cufflinks 0.925        
cufflinks 0.81        
cufflinks 1.048        
cufflinks 25.532       High
cufflinks 10.673       Low
cufflinks 10.178       Low
cufflinks 17.663        
cufflinks 21.936       High
cufflinks 13.804        

0 Strain