Gene : Potri.001G052400 P. trichocarpa v3.0
Defline:  (1 of 2) 3.6.1.19 - Nucleoside-triphosphate diphosphatase / Nucleoside-triphosphate pyrophosphatase Genomic Order:  524
Name:  ? Potri.001G052400 Secondary Identifier:  ? PAC:27047948
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7206 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6545 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7211 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7184 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G052400 0.5kb upstream 0.5kb upstream 4369 true Chr01: 3997339-4001707 Populus trichocarpa
Potri.001G052400 0.5kb upstream 0.5kb upstream 500 false Chr01: 4001208-4001707 Populus trichocarpa
Potri.001G052400 0.5kb downstream 0.5kb downstream 4369 true Chr01: 3996839-4001207 Populus trichocarpa
Potri.001G052400 0.5kb downstream 0.5kb downstream 500 false Chr01: 3996839-3997338 Populus trichocarpa
Potri.001G052400 1.0kb upstream 1.0kb upstream 4869 true Chr01: 3997339-4002207 Populus trichocarpa
Potri.001G052400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 4001208-4002207 Populus trichocarpa
Potri.001G052400 1.0kb downstream 1.0kb downstream 4869 true Chr01: 3996339-4001207 Populus trichocarpa
Potri.001G052400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3996339-3997338 Populus trichocarpa
Potri.001G052400 2.0kb upstream 2.0kb upstream 5869 true Chr01: 3997339-4003207 Populus trichocarpa
Potri.001G052400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 4001208-4003207 Populus trichocarpa
Potri.001G052400 2.0kb downstream 2.0kb downstream 5869 true Chr01: 3995339-4001207 Populus trichocarpa
Potri.001G052400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3995339-3997338 Populus trichocarpa
Potri.001G052400 5.0kb upstream 5.0kb upstream 8869 true Chr01: 3997339-4006207 Populus trichocarpa
Potri.001G052400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 4001208-4006207 Populus trichocarpa
Potri.001G052400 5.0kb downstream 5.0kb downstream 8869 true Chr01: 3992339-4001207 Populus trichocarpa
Potri.001G052400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3992339-3997338 Populus trichocarpa
Potri.001G052400 10.0kb upstream 10.0kb upstream 13869 true Chr01: 3997339-4011207 Populus trichocarpa
Potri.001G052400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 4001208-4011207 Populus trichocarpa
Potri.001G052400 10.0kb downstream 10.0kb downstream 13869 true Chr01: 3987339-4001207 Populus trichocarpa
Potri.001G052400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3987339-3997338 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.336        
cufflinks 2.326        
cufflinks 1.84       Low
cufflinks 2.247        
cufflinks 3.581       High
cufflinks 3.473       High
cufflinks 1.949        
cufflinks 1.956        
cufflinks 2.769        
cufflinks 1.644       Low
cufflinks 2.292        
cufflinks 2.735        
cufflinks 2.03        
cufflinks 2.286        
cufflinks 2.951        
cufflinks 3.355       High
cufflinks 2.01        
cufflinks 1.912       Low
cufflinks 2.848        
cufflinks 2.04        
cufflinks 3.644       High
cufflinks 2.725        
cufflinks 2.881        
cufflinks 2.085        
cufflinks 5.875        
cufflinks 5.546        
cufflinks 5.433        
cufflinks 10.093       High
cufflinks 10.36       High
cufflinks 5.182        

0 Strain