Gene : Potri.001G116000 P. trichocarpa v3.0
Defline:  (1 of 2) K10845 - TFIIH basal transcription factor complex TTD-A subunit (TTDA, GTF2H5, TFB5) Genomic Order:  1160
Name:  ? Potri.001G116000 Secondary Identifier:  ? PAC:27043120
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G116000 0.5kb upstream 0.5kb upstream 2039 true Chr01: 9297176-9299214 Populus trichocarpa
Potri.001G116000 0.5kb upstream 0.5kb upstream 500 false Chr01: 9298715-9299214 Populus trichocarpa
Potri.001G116000 0.5kb downstream 0.5kb downstream 2039 true Chr01: 9296676-9298714 Populus trichocarpa
Potri.001G116000 0.5kb downstream 0.5kb downstream 500 false Chr01: 9296676-9297175 Populus trichocarpa
Potri.001G116000 1.0kb upstream 1.0kb upstream 2539 true Chr01: 9297176-9299714 Populus trichocarpa
Potri.001G116000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 9298715-9299714 Populus trichocarpa
Potri.001G116000 1.0kb downstream 1.0kb downstream 2539 true Chr01: 9296176-9298714 Populus trichocarpa
Potri.001G116000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 9296176-9297175 Populus trichocarpa
Potri.001G116000 2.0kb upstream 2.0kb upstream 3539 true Chr01: 9297176-9300714 Populus trichocarpa
Potri.001G116000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 9298715-9300714 Populus trichocarpa
Potri.001G116000 2.0kb downstream 2.0kb downstream 3539 true Chr01: 9295176-9298714 Populus trichocarpa
Potri.001G116000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 9295176-9297175 Populus trichocarpa
Potri.001G116000 5.0kb upstream 5.0kb upstream 6539 true Chr01: 9297176-9303714 Populus trichocarpa
Potri.001G116000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 9298715-9303714 Populus trichocarpa
Potri.001G116000 5.0kb downstream 5.0kb downstream 6539 true Chr01: 9292176-9298714 Populus trichocarpa
Potri.001G116000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 9292176-9297175 Populus trichocarpa
Potri.001G116000 10.0kb upstream 10.0kb upstream 11539 true Chr01: 9297176-9308714 Populus trichocarpa
Potri.001G116000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 9298715-9308714 Populus trichocarpa
Potri.001G116000 10.0kb downstream 10.0kb downstream 11539 true Chr01: 9287176-9298714 Populus trichocarpa
Potri.001G116000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 9287176-9297175 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.406        
cufflinks 4.029        
cufflinks 3.004        
cufflinks 3.347        
cufflinks 4.171        
cufflinks 8.955       High
cufflinks 6.778       High
cufflinks 3.042        
cufflinks 7.305       High
cufflinks 2.981        
cufflinks 4.842        
cufflinks 2.426        
cufflinks 2.171        
cufflinks 3.42        
cufflinks 3.348        
cufflinks 1.715       Low
cufflinks 2.834        
cufflinks 2.027       Low
cufflinks 1.081       Low
cufflinks 7.076       High
cufflinks 3.082        
cufflinks 5.218        
cufflinks 2.759        
cufflinks 4.559        
cufflinks 14.768        
cufflinks 14.079        
cufflinks 12.483        
cufflinks 15.097        
cufflinks 17.653       High
cufflinks 15.76       High

0 Strain