Gene : Potri.001G349800 P. trichocarpa v3.0
Defline:  (1 of 1) 2.1.1.171 - 16S rRNA (guanine(966)-N(2))-methyltransferase / M(2)G966 methyltransferase Genomic Order:  3498
Name:  ? Potri.001G349800 Secondary Identifier:  ? PAC:27042994
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G349800 0.5kb upstream 0.5kb upstream 3798 true Chr01: 35629581-35633378 Populus trichocarpa
Potri.001G349800 0.5kb upstream 0.5kb upstream 500 false Chr01: 35629581-35630080 Populus trichocarpa
Potri.001G349800 0.5kb downstream 0.5kb downstream 3798 true Chr01: 35630081-35633878 Populus trichocarpa
Potri.001G349800 0.5kb downstream 0.5kb downstream 500 false Chr01: 35633379-35633878 Populus trichocarpa
Potri.001G349800 1.0kb upstream 1.0kb upstream 4298 true Chr01: 35629081-35633378 Populus trichocarpa
Potri.001G349800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 35629081-35630080 Populus trichocarpa
Potri.001G349800 1.0kb downstream 1.0kb downstream 4298 true Chr01: 35630081-35634378 Populus trichocarpa
Potri.001G349800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 35633379-35634378 Populus trichocarpa
Potri.001G349800 2.0kb upstream 2.0kb upstream 5298 true Chr01: 35628081-35633378 Populus trichocarpa
Potri.001G349800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 35628081-35630080 Populus trichocarpa
Potri.001G349800 2.0kb downstream 2.0kb downstream 5298 true Chr01: 35630081-35635378 Populus trichocarpa
Potri.001G349800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 35633379-35635378 Populus trichocarpa
Potri.001G349800 5.0kb upstream 5.0kb upstream 8298 true Chr01: 35625081-35633378 Populus trichocarpa
Potri.001G349800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 35625081-35630080 Populus trichocarpa
Potri.001G349800 5.0kb downstream 5.0kb downstream 8298 true Chr01: 35630081-35638378 Populus trichocarpa
Potri.001G349800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 35633379-35638378 Populus trichocarpa
Potri.001G349800 10.0kb upstream 10.0kb upstream 13298 true Chr01: 35620081-35633378 Populus trichocarpa
Potri.001G349800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 35620081-35630080 Populus trichocarpa
Potri.001G349800 10.0kb downstream 10.0kb downstream 13298 true Chr01: 35630081-35643378 Populus trichocarpa
Potri.001G349800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 35633379-35643378 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.597       Low
cufflinks 1.36        
cufflinks 0.481       Low
cufflinks 0.539       Low
cufflinks 1.674        
cufflinks 1.765       High
cufflinks 1.274        
cufflinks 0.956        
cufflinks 0.375       Low
cufflinks 0.607       Low
cufflinks 0.727        
cufflinks 0.8        
cufflinks 0.793        
cufflinks 3.025       High
cufflinks 2.064       High
cufflinks 0.538       Low
cufflinks 0.954        
cufflinks 1.698        
cufflinks 1.186        
cufflinks 1.418        
cufflinks 1.151        
cufflinks 1.263        
cufflinks 1.435        
cufflinks 1.205        
cufflinks 27.494        
cufflinks 30.813     High High
cufflinks 29.22     High  
cufflinks 27.909        
cufflinks 22.61        
cufflinks 28.508     High  

0 Strain