Gene : Potri.001G198000 P. trichocarpa v3.0
Defline:  (1 of 2) PTHR23151//PTHR23151:SF59 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1980
Name:  ? Potri.001G198000 Secondary Identifier:  ? PAC:27041853
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5173 Populus trichocarpa pathologic  
Ptrichocarpa PYRUVDEHYD-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G198000 0.5kb upstream 0.5kb upstream 7117 true Chr01: 19109161-19116277 Populus trichocarpa
Potri.001G198000 0.5kb upstream 0.5kb upstream 500 false Chr01: 19109161-19109660 Populus trichocarpa
Potri.001G198000 0.5kb downstream 0.5kb downstream 7117 true Chr01: 19109661-19116777 Populus trichocarpa
Potri.001G198000 0.5kb downstream 0.5kb downstream 500 false Chr01: 19116278-19116777 Populus trichocarpa
Potri.001G198000 1.0kb upstream 1.0kb upstream 7617 true Chr01: 19108661-19116277 Populus trichocarpa
Potri.001G198000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 19108661-19109660 Populus trichocarpa
Potri.001G198000 1.0kb downstream 1.0kb downstream 7617 true Chr01: 19109661-19117277 Populus trichocarpa
Potri.001G198000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 19116278-19117277 Populus trichocarpa
Potri.001G198000 2.0kb upstream 2.0kb upstream 8617 true Chr01: 19107661-19116277 Populus trichocarpa
Potri.001G198000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 19107661-19109660 Populus trichocarpa
Potri.001G198000 2.0kb downstream 2.0kb downstream 8617 true Chr01: 19109661-19118277 Populus trichocarpa
Potri.001G198000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 19116278-19118277 Populus trichocarpa
Potri.001G198000 5.0kb upstream 5.0kb upstream 11617 true Chr01: 19104661-19116277 Populus trichocarpa
Potri.001G198000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 19104661-19109660 Populus trichocarpa
Potri.001G198000 5.0kb downstream 5.0kb downstream 11617 true Chr01: 19109661-19121277 Populus trichocarpa
Potri.001G198000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 19116278-19121277 Populus trichocarpa
Potri.001G198000 10.0kb upstream 10.0kb upstream 16617 true Chr01: 19099661-19116277 Populus trichocarpa
Potri.001G198000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 19099661-19109660 Populus trichocarpa
Potri.001G198000 10.0kb downstream 10.0kb downstream 16617 true Chr01: 19109661-19126277 Populus trichocarpa
Potri.001G198000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 19116278-19126277 Populus trichocarpa

0 Protein Family

40 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.129        
cufflinks 1.138        
cufflinks 3.048       High
cufflinks 3.169       High
cufflinks 0.956       Low
cufflinks 1.137        
cufflinks 1.811        
cufflinks 2.547       High
cufflinks 1.168        
cufflinks 1.723        
cufflinks 1.566        
cufflinks 1.563        
cufflinks 0.927       Low
cufflinks 1.251        
cufflinks 1.534        
cufflinks 1.022       Low
cufflinks 0.926       Low
cufflinks 1.684        
cufflinks 2.172        
cufflinks 0.918       Low
cufflinks 1.987        
cufflinks 1.207        
cufflinks 1.761        
cufflinks 2.516       High
cufflinks 0.399     Low High
cufflinks 0.203     Low  
cufflinks 0.321     Low  
cufflinks 0.248     Low  
cufflinks 0.258     Low  
cufflinks 0.206     Low  

0 Strain